Genetic Evidence for Geographic Structure within the  Neanderthal Population

PSMC estimates of Neanderthal effective population size (Ne) exhibit a roughly 5-fold decline across the most recent 20~ky before the death of each fossil. To explain this pattern, this article develops new theory relating genetic variation to geographic population structure and local extinction. It...

Full description

Saved in:
Bibliographic Details
Main Author: Rogers, Alan R.
Format: Article
Language:English
Published: Peer Community In 2024-07-01
Series:Peer Community Journal
Subjects:
Online Access:https://peercommunityjournal.org/articles/10.24072/pcjournal.448/
Tags: Add Tag
No Tags, Be the first to tag this record!
Description
Summary:PSMC estimates of Neanderthal effective population size (Ne) exhibit a roughly 5-fold decline across the most recent 20~ky before the death of each fossil. To explain this pattern, this article develops new theory relating genetic variation to geographic population structure and local extinction. It argues that the observed pattern results from subdivision and gene flow. If two haploid genomes are sampled from the same subpopulation, their recent ancestors are likely to be geographic neighbors and therefore coalesce rapidly. By contrast, remote ancestors are likely to be far apart, and their coalescent rate is lower. Consequently, Ne is larger in the distant past than in the recent past. New theoretical results show that modest rates of extinction cause substantial reductions in heterozygosity, Wright's FST, and Ne.
ISSN:2804-3871