Deep cryptic diversity in the Craugastor podiciferus Species Group (Anura: Craugastoridae) of Isthmian Central America revealed by mitochondrial and nuclear data

The Craugastor podiciferus Species Group contains eleven species of terraranan frogs distributed from eastern Honduras to eastern Panama. All species have remarkable color pattern polymorphisms, which may contribute to potential taxonomic problems. We performed exhaustive sampling throughout the geo...

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Main Authors: Erick Arias, Andrew J. Crawford, Andreas Hertz, Gabriela Parra Olea
Format: Article
Language:English
Published: PeerJ Inc. 2025-01-01
Series:PeerJ
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Online Access:https://peerj.com/articles/18212.pdf
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author Erick Arias
Andrew J. Crawford
Andreas Hertz
Gabriela Parra Olea
author_facet Erick Arias
Andrew J. Crawford
Andreas Hertz
Gabriela Parra Olea
author_sort Erick Arias
collection DOAJ
description The Craugastor podiciferus Species Group contains eleven species of terraranan frogs distributed from eastern Honduras to eastern Panama. All species have remarkable color pattern polymorphisms, which may contribute to potential taxonomic problems. We performed exhaustive sampling throughout the geographic distribution of the group to evaluate the phylogenetic relationships and biogeographic history of all named species based on two mitochondrial markers and nuclear ddRAD loci. We also implemented various species delimitation methods to test for the presence of unconfirmed candidate species within the group. Molecular phylogenetic analyses showed that the group contains four major clades. All currently named species are supported by molecular data, yet species richness within the group is clearly underestimated. Species delimitation was discordant between the mitochondrial and nuclear datasets and among analytical methods. Adopting a conservative approach, we propose that the C. podiciferus species group contains at least 12 unconfirmed candidate species. Ancestral area reconstruction showed that the group originated and diversified in the highlands of the Talamancan montane forest ecoregion of Costa Rica and western Panama.
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issn 2167-8359
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spelling doaj-art-2087b144413347c588abe4c99a8af2012025-01-19T15:05:07ZengPeerJ Inc.PeerJ2167-83592025-01-0113e1821210.7717/peerj.18212Deep cryptic diversity in the Craugastor podiciferus Species Group (Anura: Craugastoridae) of Isthmian Central America revealed by mitochondrial and nuclear dataErick Arias0Andrew J. Crawford1Andreas Hertz2Gabriela Parra Olea3Escuela de Biología, Universidad de Costa Rica, San José, Costa RicaDepartamento de Ciencias Biológicas, Universidad de los Andes, Bogotá, ColombiaDepartment of Biology, University of Massachusetts at Boston, Boston, MA, United States of AmericaZoology, Instituto de Biología, UNAM, Mexico City, MexicoThe Craugastor podiciferus Species Group contains eleven species of terraranan frogs distributed from eastern Honduras to eastern Panama. All species have remarkable color pattern polymorphisms, which may contribute to potential taxonomic problems. We performed exhaustive sampling throughout the geographic distribution of the group to evaluate the phylogenetic relationships and biogeographic history of all named species based on two mitochondrial markers and nuclear ddRAD loci. We also implemented various species delimitation methods to test for the presence of unconfirmed candidate species within the group. Molecular phylogenetic analyses showed that the group contains four major clades. All currently named species are supported by molecular data, yet species richness within the group is clearly underestimated. Species delimitation was discordant between the mitochondrial and nuclear datasets and among analytical methods. Adopting a conservative approach, we propose that the C. podiciferus species group contains at least 12 unconfirmed candidate species. Ancestral area reconstruction showed that the group originated and diversified in the highlands of the Talamancan montane forest ecoregion of Costa Rica and western Panama.https://peerj.com/articles/18212.pdfAncestral area reconstructionCosta RicaHistorical biogeographyCandidate speciesSpecies delimitationSystematics
spellingShingle Erick Arias
Andrew J. Crawford
Andreas Hertz
Gabriela Parra Olea
Deep cryptic diversity in the Craugastor podiciferus Species Group (Anura: Craugastoridae) of Isthmian Central America revealed by mitochondrial and nuclear data
PeerJ
Ancestral area reconstruction
Costa Rica
Historical biogeography
Candidate species
Species delimitation
Systematics
title Deep cryptic diversity in the Craugastor podiciferus Species Group (Anura: Craugastoridae) of Isthmian Central America revealed by mitochondrial and nuclear data
title_full Deep cryptic diversity in the Craugastor podiciferus Species Group (Anura: Craugastoridae) of Isthmian Central America revealed by mitochondrial and nuclear data
title_fullStr Deep cryptic diversity in the Craugastor podiciferus Species Group (Anura: Craugastoridae) of Isthmian Central America revealed by mitochondrial and nuclear data
title_full_unstemmed Deep cryptic diversity in the Craugastor podiciferus Species Group (Anura: Craugastoridae) of Isthmian Central America revealed by mitochondrial and nuclear data
title_short Deep cryptic diversity in the Craugastor podiciferus Species Group (Anura: Craugastoridae) of Isthmian Central America revealed by mitochondrial and nuclear data
title_sort deep cryptic diversity in the craugastor podiciferus species group anura craugastoridae of isthmian central america revealed by mitochondrial and nuclear data
topic Ancestral area reconstruction
Costa Rica
Historical biogeography
Candidate species
Species delimitation
Systematics
url https://peerj.com/articles/18212.pdf
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