IMA Genome – F19
Abstract The pace at which Next Generation Sequence data is being produced continues to accelerate as technology improves. As a result, such data are increasingly becoming accessible to biologists outside of the field of bioinformatics. In contrast, access to training in the methods of genome assemb...
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| Format: | Article |
| Language: | English |
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BMC
2024-06-01
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| Series: | IMA Fungus |
| Online Access: | https://doi.org/10.1186/s43008-024-00142-z |
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| author | Janneke Aylward Andi M. Wilson Cobus M. Visagie Joseph Spraker Irene Barnes Carla Buitendag Callin Ceriani Lina Del Mar Angel Deanné du Plessis Taygen Fuchs Katharina Gasser Daniella Krämer WenWen Li Kiara Munsamy Anja Piso Jenna-Lee Price Byron Sonnekus Chanel Thomas Ariska van der Nest Alida van Dijk Alishia van Heerden Nicole van Vuuren Neriman Yilmaz Tuan A. Duong Nicolaas A. van der Merwe Michael J. Wingfield Brenda D. Wingfield |
| author_facet | Janneke Aylward Andi M. Wilson Cobus M. Visagie Joseph Spraker Irene Barnes Carla Buitendag Callin Ceriani Lina Del Mar Angel Deanné du Plessis Taygen Fuchs Katharina Gasser Daniella Krämer WenWen Li Kiara Munsamy Anja Piso Jenna-Lee Price Byron Sonnekus Chanel Thomas Ariska van der Nest Alida van Dijk Alishia van Heerden Nicole van Vuuren Neriman Yilmaz Tuan A. Duong Nicolaas A. van der Merwe Michael J. Wingfield Brenda D. Wingfield |
| author_sort | Janneke Aylward |
| collection | DOAJ |
| description | Abstract The pace at which Next Generation Sequence data is being produced continues to accelerate as technology improves. As a result, such data are increasingly becoming accessible to biologists outside of the field of bioinformatics. In contrast, access to training in the methods of genome assembly and annotation are not growing at a similar rate. In this issue, we report on a Genome Assembly Workshop for Mycologists that was held at the Forestry and Agricultural Biotechnology Institute (FABI) at the University of Pretoria, South Africa and make available the 12 draft genome sequences emanating from the event. With the aim of making the process of genome assembly and annotation more accessible to biologists, we provide a step-by-step guide to both genome assembly and annotation, intended to encourage and empower mycologists to use genome data in their research. |
| format | Article |
| id | doaj-art-1453c6ac8d9d4c128e3f89b7bc488b1d |
| institution | Kabale University |
| issn | 2210-6359 |
| language | English |
| publishDate | 2024-06-01 |
| publisher | BMC |
| record_format | Article |
| series | IMA Fungus |
| spelling | doaj-art-1453c6ac8d9d4c128e3f89b7bc488b1d2025-02-02T22:27:09ZengBMCIMA Fungus2210-63592024-06-0115112010.1186/s43008-024-00142-zIMA Genome – F19Janneke Aylward0Andi M. Wilson1Cobus M. Visagie2Joseph Spraker3Irene Barnes4Carla Buitendag5Callin Ceriani6Lina Del Mar Angel7Deanné du Plessis8Taygen Fuchs9Katharina Gasser10Daniella Krämer11WenWen Li12Kiara Munsamy13Anja Piso14Jenna-Lee Price15Byron Sonnekus16Chanel Thomas17Ariska van der Nest18Alida van Dijk19Alishia van Heerden20Nicole van Vuuren21Neriman Yilmaz22Tuan A. Duong23Nicolaas A. van der Merwe24Michael J. Wingfield25Brenda D. Wingfield26Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaHexagon BioDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Crop Sciences, University of Natural Resources and Life Sciences (BOKU), Institute of Plant ProtectionDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Plant and Soil Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaDepartment of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of PretoriaAbstract The pace at which Next Generation Sequence data is being produced continues to accelerate as technology improves. As a result, such data are increasingly becoming accessible to biologists outside of the field of bioinformatics. In contrast, access to training in the methods of genome assembly and annotation are not growing at a similar rate. In this issue, we report on a Genome Assembly Workshop for Mycologists that was held at the Forestry and Agricultural Biotechnology Institute (FABI) at the University of Pretoria, South Africa and make available the 12 draft genome sequences emanating from the event. With the aim of making the process of genome assembly and annotation more accessible to biologists, we provide a step-by-step guide to both genome assembly and annotation, intended to encourage and empower mycologists to use genome data in their research.https://doi.org/10.1186/s43008-024-00142-z |
| spellingShingle | Janneke Aylward Andi M. Wilson Cobus M. Visagie Joseph Spraker Irene Barnes Carla Buitendag Callin Ceriani Lina Del Mar Angel Deanné du Plessis Taygen Fuchs Katharina Gasser Daniella Krämer WenWen Li Kiara Munsamy Anja Piso Jenna-Lee Price Byron Sonnekus Chanel Thomas Ariska van der Nest Alida van Dijk Alishia van Heerden Nicole van Vuuren Neriman Yilmaz Tuan A. Duong Nicolaas A. van der Merwe Michael J. Wingfield Brenda D. Wingfield IMA Genome – F19 IMA Fungus |
| title | IMA Genome – F19 |
| title_full | IMA Genome – F19 |
| title_fullStr | IMA Genome – F19 |
| title_full_unstemmed | IMA Genome – F19 |
| title_short | IMA Genome – F19 |
| title_sort | ima genome f19 |
| url | https://doi.org/10.1186/s43008-024-00142-z |
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