A reference genome for the eastern bettong (Bettongia gaimardi) [version 2; peer review: 2 approved, 1 approved with reservations]
Abstract The eastern or Tasmanian bettong (Bettongia gaimardi) is one of four extant bettong species and is listed as ‘Near Threatened’ by the IUCN. We sequenced short read data on the 10x system to generate a reference genome 3.46Gb in size and contig N50 of 87.36Kb and scaffold N50 of 2.93Mb. Addi...
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F1000 Research Ltd
2025-01-01
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| Online Access: | https://f1000research.com/articles/13-1544/v2 |
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| author | Richard J Edwards Luke W Silver Sam Banks Carolyn J Hogg Adrian D. Manning Linda Neaves |
| author_facet | Richard J Edwards Luke W Silver Sam Banks Carolyn J Hogg Adrian D. Manning Linda Neaves |
| author_sort | Richard J Edwards |
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| description | Abstract The eastern or Tasmanian bettong (Bettongia gaimardi) is one of four extant bettong species and is listed as ‘Near Threatened’ by the IUCN. We sequenced short read data on the 10x system to generate a reference genome 3.46Gb in size and contig N50 of 87.36Kb and scaffold N50 of 2.93Mb. Additionally, we used GeMoMa to provide and accompanying annotation for the reference genome. The generation of a reference genome for the eastern bettong provides a vital resource for the conservation of the species. |
| format | Article |
| id | doaj-art-111fdd7b79b0469b9ace68cd82ac6306 |
| institution | Kabale University |
| issn | 2046-1402 |
| language | English |
| publishDate | 2025-01-01 |
| publisher | F1000 Research Ltd |
| record_format | Article |
| series | F1000Research |
| spelling | doaj-art-111fdd7b79b0469b9ace68cd82ac63062025-01-28T01:00:03ZengF1000 Research LtdF1000Research2046-14022025-01-0113177228A reference genome for the eastern bettong (Bettongia gaimardi) [version 2; peer review: 2 approved, 1 approved with reservations]Richard J Edwards0Luke W Silver1https://orcid.org/0000-0002-1718-5756Sam Banks2Carolyn J Hogg3https://orcid.org/0000-0002-6328-398XAdrian D. Manning4Linda Neaves5Minderoo OceanOmics Centre at UWA, The University of Western Australia Oceans Institute, Crawley, Western Australia, 6009, AustraliaAustralian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, The University of Sydney, Camperdown, NSW, 2006, AustraliaCharles Darwin University Research Institute for the Environment and Livelihoods, Casuarina, Northern Territory, 0909, AustraliaAustralian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, The University of Sydney, Camperdown, NSW, 2006, AustraliaAustralian National University Fenner School of Environment and Society, Acton, Australian Capital Territory, 2601, AustraliaAustralian National University Fenner School of Environment and Society, Acton, Australian Capital Territory, 2601, AustraliaAbstract The eastern or Tasmanian bettong (Bettongia gaimardi) is one of four extant bettong species and is listed as ‘Near Threatened’ by the IUCN. We sequenced short read data on the 10x system to generate a reference genome 3.46Gb in size and contig N50 of 87.36Kb and scaffold N50 of 2.93Mb. Additionally, we used GeMoMa to provide and accompanying annotation for the reference genome. The generation of a reference genome for the eastern bettong provides a vital resource for the conservation of the species.https://f1000research.com/articles/13-1544/v2Genome annotation reference genome bettong marsupialeng |
| spellingShingle | Richard J Edwards Luke W Silver Sam Banks Carolyn J Hogg Adrian D. Manning Linda Neaves A reference genome for the eastern bettong (Bettongia gaimardi) [version 2; peer review: 2 approved, 1 approved with reservations] F1000Research Genome annotation reference genome bettong marsupial eng |
| title | A reference genome for the eastern bettong (Bettongia gaimardi) [version 2; peer review: 2 approved, 1 approved with reservations] |
| title_full | A reference genome for the eastern bettong (Bettongia gaimardi) [version 2; peer review: 2 approved, 1 approved with reservations] |
| title_fullStr | A reference genome for the eastern bettong (Bettongia gaimardi) [version 2; peer review: 2 approved, 1 approved with reservations] |
| title_full_unstemmed | A reference genome for the eastern bettong (Bettongia gaimardi) [version 2; peer review: 2 approved, 1 approved with reservations] |
| title_short | A reference genome for the eastern bettong (Bettongia gaimardi) [version 2; peer review: 2 approved, 1 approved with reservations] |
| title_sort | reference genome for the eastern bettong bettongia gaimardi version 2 peer review 2 approved 1 approved with reservations |
| topic | Genome annotation reference genome bettong marsupial eng |
| url | https://f1000research.com/articles/13-1544/v2 |
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