SARS-CoV-2 Evolution: Implications for Diagnosis, Treatment, Vaccine Effectiveness and Development

The COVID-19 pandemic, driven by the rapid evolution of the SARS-CoV-2 virus, presents ongoing challenges to global public health. SARS-CoV-2 is characterized by rapidly evolving mutations, especially in (but not limited to) the spike protein, complicating predictions about its evolutionary trajecto...

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Main Authors: Fabrizio Angius, Silvia Puxeddu, Silvio Zaimi, Serena Canton, Sepehr Nematollahzadeh, Andrea Pibiri, Ilenia Delogu, Gualtiero Alvisi, Meng Ling Moi, Aldo Manzin
Format: Article
Language:English
Published: MDPI AG 2024-12-01
Series:Vaccines
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Online Access:https://www.mdpi.com/2076-393X/13/1/17
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author Fabrizio Angius
Silvia Puxeddu
Silvio Zaimi
Serena Canton
Sepehr Nematollahzadeh
Andrea Pibiri
Ilenia Delogu
Gualtiero Alvisi
Meng Ling Moi
Aldo Manzin
author_facet Fabrizio Angius
Silvia Puxeddu
Silvio Zaimi
Serena Canton
Sepehr Nematollahzadeh
Andrea Pibiri
Ilenia Delogu
Gualtiero Alvisi
Meng Ling Moi
Aldo Manzin
author_sort Fabrizio Angius
collection DOAJ
description The COVID-19 pandemic, driven by the rapid evolution of the SARS-CoV-2 virus, presents ongoing challenges to global public health. SARS-CoV-2 is characterized by rapidly evolving mutations, especially in (but not limited to) the spike protein, complicating predictions about its evolutionary trajectory. These mutations have significantly affected transmissibility, immune evasion, and vaccine efficacy, leading to multiple pandemic waves with over half a billion cases and seven million deaths globally. Despite several strategies, from rapid vaccine development and administration to the design and availability of antivirals, including monoclonal antibodies, already having been employed, the persistent circulation of the virus and the emergence of new variants continue to result in high case numbers and fatalities. In the past four years, immense research efforts have contributed much to our understanding of the viral pathogenesis mechanism, the COVID-19 syndrome, and the host–microbe interactions, leading to the development of effective vaccines, diagnostic tools, and treatments. The focus of this review is to provide a comprehensive analysis of the functional impact of mutations on diagnosis, treatments, and vaccine effectiveness. We further discuss vaccine safety in pregnancy and the implications of hybrid immunity on long-term protection against infection, as well as the latest developments on a pan-coronavirus vaccine and nasal formulations, emphasizing the need for continued surveillance, research, and adaptive public health strategies in response to the ongoing SARS-CoV-2 evolution race.
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spelling doaj-art-0b14a2b02bc242fcb4e7e2821fa7e5b02025-01-24T13:51:40ZengMDPI AGVaccines2076-393X2024-12-011311710.3390/vaccines13010017SARS-CoV-2 Evolution: Implications for Diagnosis, Treatment, Vaccine Effectiveness and DevelopmentFabrizio Angius0Silvia Puxeddu1Silvio Zaimi2Serena Canton3Sepehr Nematollahzadeh4Andrea Pibiri5Ilenia Delogu6Gualtiero Alvisi7Meng Ling Moi8Aldo Manzin9Microbiology and Virology Unit, Department of Biomedical Sciences, University of Cagliari, University Campus, 09042 Monserrato, ItalyMicrobiology and Virology Unit, Department of Biomedical Sciences, University of Cagliari, University Campus, 09042 Monserrato, ItalyMicrobiology and Virology Unit, Department of Biomedical Sciences, University of Cagliari, University Campus, 09042 Monserrato, ItalyMicrobiology and Virology Unit, Department of Biomedical Sciences, University of Cagliari, University Campus, 09042 Monserrato, ItalyDepartment of Molecular Medicine, University of Padova, 35121 Padova, ItalyMicrobiology and Virology Unit, Department of Biomedical Sciences, University of Cagliari, University Campus, 09042 Monserrato, ItalyMicrobiology and Virology Unit, Department of Biomedical Sciences, University of Cagliari, University Campus, 09042 Monserrato, ItalyDepartment of Molecular Medicine, University of Padova, 35121 Padova, ItalySchool of International Health, Graduate School of Medicine, The University of Tokyo, Tokyo 113-0033, JapanMicrobiology and Virology Unit, Department of Biomedical Sciences, University of Cagliari, University Campus, 09042 Monserrato, ItalyThe COVID-19 pandemic, driven by the rapid evolution of the SARS-CoV-2 virus, presents ongoing challenges to global public health. SARS-CoV-2 is characterized by rapidly evolving mutations, especially in (but not limited to) the spike protein, complicating predictions about its evolutionary trajectory. These mutations have significantly affected transmissibility, immune evasion, and vaccine efficacy, leading to multiple pandemic waves with over half a billion cases and seven million deaths globally. Despite several strategies, from rapid vaccine development and administration to the design and availability of antivirals, including monoclonal antibodies, already having been employed, the persistent circulation of the virus and the emergence of new variants continue to result in high case numbers and fatalities. In the past four years, immense research efforts have contributed much to our understanding of the viral pathogenesis mechanism, the COVID-19 syndrome, and the host–microbe interactions, leading to the development of effective vaccines, diagnostic tools, and treatments. The focus of this review is to provide a comprehensive analysis of the functional impact of mutations on diagnosis, treatments, and vaccine effectiveness. We further discuss vaccine safety in pregnancy and the implications of hybrid immunity on long-term protection against infection, as well as the latest developments on a pan-coronavirus vaccine and nasal formulations, emphasizing the need for continued surveillance, research, and adaptive public health strategies in response to the ongoing SARS-CoV-2 evolution race.https://www.mdpi.com/2076-393X/13/1/17SARS-CoV-2variantsvaccinesCOVID-19diagnosistreatments
spellingShingle Fabrizio Angius
Silvia Puxeddu
Silvio Zaimi
Serena Canton
Sepehr Nematollahzadeh
Andrea Pibiri
Ilenia Delogu
Gualtiero Alvisi
Meng Ling Moi
Aldo Manzin
SARS-CoV-2 Evolution: Implications for Diagnosis, Treatment, Vaccine Effectiveness and Development
Vaccines
SARS-CoV-2
variants
vaccines
COVID-19
diagnosis
treatments
title SARS-CoV-2 Evolution: Implications for Diagnosis, Treatment, Vaccine Effectiveness and Development
title_full SARS-CoV-2 Evolution: Implications for Diagnosis, Treatment, Vaccine Effectiveness and Development
title_fullStr SARS-CoV-2 Evolution: Implications for Diagnosis, Treatment, Vaccine Effectiveness and Development
title_full_unstemmed SARS-CoV-2 Evolution: Implications for Diagnosis, Treatment, Vaccine Effectiveness and Development
title_short SARS-CoV-2 Evolution: Implications for Diagnosis, Treatment, Vaccine Effectiveness and Development
title_sort sars cov 2 evolution implications for diagnosis treatment vaccine effectiveness and development
topic SARS-CoV-2
variants
vaccines
COVID-19
diagnosis
treatments
url https://www.mdpi.com/2076-393X/13/1/17
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