Functional Characterization of Anthocyanin Biosynthesis-Related <i>Dihydroflavonol 4-reductase</i> (<i>DFR</i>) Genes in Blueberries (<i>Vaccinium corymbosum</i>)

<i>Dihydroflavonol 4-reductase</i> (<i>DFR</i>) genes contribute greatly to anthocyanin biosynthesis in plants. Up to now, however, research on the <i>DFR</i> gene family and the key anthocyanin-related <i>DFR</i> members in blueberries (<i>Vacci...

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Main Authors: Yongyan Zhang, Sijian Guo, Zening Zhang, Ruide Li, Shitao Du, Siyi Hao, Chunzhen Cheng
Format: Article
Language:English
Published: MDPI AG 2025-05-01
Series:Plants
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Online Access:https://www.mdpi.com/2223-7747/14/10/1449
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author Yongyan Zhang
Sijian Guo
Zening Zhang
Ruide Li
Shitao Du
Siyi Hao
Chunzhen Cheng
author_facet Yongyan Zhang
Sijian Guo
Zening Zhang
Ruide Li
Shitao Du
Siyi Hao
Chunzhen Cheng
author_sort Yongyan Zhang
collection DOAJ
description <i>Dihydroflavonol 4-reductase</i> (<i>DFR</i>) genes contribute greatly to anthocyanin biosynthesis in plants. Up to now, however, research on the <i>DFR</i> gene family and the key anthocyanin-related <i>DFR</i> members in blueberries (<i>Vaccinium corymbosum</i>) has been limited. In this study, we performed a genome-wide identification of the blueberry <i>DFR</i> gene family, identifying 36 <i>VcDFR</i> genes categorized into five subfamilies. Gene expression analysis showed that three Subfamily III members (<i>VcDFR11/29/34</i>) and four Subfamily V members (<i>VcDFR4/7/30/33</i>) are highly expressed in blueberry fruits, particularly at late ripening stages. Transient overexpression analysis in apple fruits verified the contributions of <i>VcDFR11</i> and <i>VcDFR30</i> to anthocyanin biosynthesis, with <i>VcDFR11</i> showing better promoting effects. Blueberry fruit-based transient overexpression further confirmed the promoting effects of <i>VcDFR11</i> on anthocyanin accumulation and the expression of anthocyanin-related structural genes (especially its downstream <i>anthocyanindin synthase</i> (<i>ANS</i>) and <i>UDP-glucose: flavonoid 3-O-glycosyltransferase</i> (<i>UFGT</i>) genes). The <i>VcDFR11</i> promoter contains binding sites for both bHLH and MYB transcription factors (TFs). Consistently, yeast one-hybrid and dual-luciferase assays confirmed that anthocyanin-related VcMYB-1 and VcbHLHs can bind to and activate the <i>VcDFR11</i> promoter. Furthermore, co-overexpressing <i>VcMYB-1</i>/<i>VcbHLHs</i> with <i>VcDFR11</i> led to much higher anthocyanin accumulation than overexpressing <i>VcDFR11</i> alone, indicating that these TFs positively regulate anthocyanin biosynthesis by upregulating <i>VcDFR11</i>. In summary, our study characterized the blueberry <i>DFR</i> gene family and demonstrated the role of <i>VcDFR11</i> in anthocyanin biosynthesis.
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spelling doaj-art-0a09dbbd33a04a1c831b45c93ed8f77f2025-08-20T02:33:58ZengMDPI AGPlants2223-77472025-05-011410144910.3390/plants14101449Functional Characterization of Anthocyanin Biosynthesis-Related <i>Dihydroflavonol 4-reductase</i> (<i>DFR</i>) Genes in Blueberries (<i>Vaccinium corymbosum</i>)Yongyan Zhang0Sijian Guo1Zening Zhang2Ruide Li3Shitao Du4Siyi Hao5Chunzhen Cheng6College of Horticulture, Shanxi Agricultural University, Taigu 030801, ChinaCollege of Horticulture, Shanxi Agricultural University, Taigu 030801, ChinaCollege of Horticulture, Shanxi Agricultural University, Taigu 030801, ChinaCollege of Horticulture, Shanxi Agricultural University, Taigu 030801, ChinaCollege of Horticulture, Shanxi Agricultural University, Taigu 030801, ChinaCollege of Horticulture, Shanxi Agricultural University, Taigu 030801, ChinaCollege of Horticulture, Shanxi Agricultural University, Taigu 030801, China<i>Dihydroflavonol 4-reductase</i> (<i>DFR</i>) genes contribute greatly to anthocyanin biosynthesis in plants. Up to now, however, research on the <i>DFR</i> gene family and the key anthocyanin-related <i>DFR</i> members in blueberries (<i>Vaccinium corymbosum</i>) has been limited. In this study, we performed a genome-wide identification of the blueberry <i>DFR</i> gene family, identifying 36 <i>VcDFR</i> genes categorized into five subfamilies. Gene expression analysis showed that three Subfamily III members (<i>VcDFR11/29/34</i>) and four Subfamily V members (<i>VcDFR4/7/30/33</i>) are highly expressed in blueberry fruits, particularly at late ripening stages. Transient overexpression analysis in apple fruits verified the contributions of <i>VcDFR11</i> and <i>VcDFR30</i> to anthocyanin biosynthesis, with <i>VcDFR11</i> showing better promoting effects. Blueberry fruit-based transient overexpression further confirmed the promoting effects of <i>VcDFR11</i> on anthocyanin accumulation and the expression of anthocyanin-related structural genes (especially its downstream <i>anthocyanindin synthase</i> (<i>ANS</i>) and <i>UDP-glucose: flavonoid 3-O-glycosyltransferase</i> (<i>UFGT</i>) genes). The <i>VcDFR11</i> promoter contains binding sites for both bHLH and MYB transcription factors (TFs). Consistently, yeast one-hybrid and dual-luciferase assays confirmed that anthocyanin-related VcMYB-1 and VcbHLHs can bind to and activate the <i>VcDFR11</i> promoter. Furthermore, co-overexpressing <i>VcMYB-1</i>/<i>VcbHLHs</i> with <i>VcDFR11</i> led to much higher anthocyanin accumulation than overexpressing <i>VcDFR11</i> alone, indicating that these TFs positively regulate anthocyanin biosynthesis by upregulating <i>VcDFR11</i>. In summary, our study characterized the blueberry <i>DFR</i> gene family and demonstrated the role of <i>VcDFR11</i> in anthocyanin biosynthesis.https://www.mdpi.com/2223-7747/14/10/1449anthocyanin biosynthesisblueberrydihydroflavonol 4-reductasepromoter activationtranscriptional regulation
spellingShingle Yongyan Zhang
Sijian Guo
Zening Zhang
Ruide Li
Shitao Du
Siyi Hao
Chunzhen Cheng
Functional Characterization of Anthocyanin Biosynthesis-Related <i>Dihydroflavonol 4-reductase</i> (<i>DFR</i>) Genes in Blueberries (<i>Vaccinium corymbosum</i>)
Plants
anthocyanin biosynthesis
blueberry
dihydroflavonol 4-reductase
promoter activation
transcriptional regulation
title Functional Characterization of Anthocyanin Biosynthesis-Related <i>Dihydroflavonol 4-reductase</i> (<i>DFR</i>) Genes in Blueberries (<i>Vaccinium corymbosum</i>)
title_full Functional Characterization of Anthocyanin Biosynthesis-Related <i>Dihydroflavonol 4-reductase</i> (<i>DFR</i>) Genes in Blueberries (<i>Vaccinium corymbosum</i>)
title_fullStr Functional Characterization of Anthocyanin Biosynthesis-Related <i>Dihydroflavonol 4-reductase</i> (<i>DFR</i>) Genes in Blueberries (<i>Vaccinium corymbosum</i>)
title_full_unstemmed Functional Characterization of Anthocyanin Biosynthesis-Related <i>Dihydroflavonol 4-reductase</i> (<i>DFR</i>) Genes in Blueberries (<i>Vaccinium corymbosum</i>)
title_short Functional Characterization of Anthocyanin Biosynthesis-Related <i>Dihydroflavonol 4-reductase</i> (<i>DFR</i>) Genes in Blueberries (<i>Vaccinium corymbosum</i>)
title_sort functional characterization of anthocyanin biosynthesis related i dihydroflavonol 4 reductase i i dfr i genes in blueberries i vaccinium corymbosum i
topic anthocyanin biosynthesis
blueberry
dihydroflavonol 4-reductase
promoter activation
transcriptional regulation
url https://www.mdpi.com/2223-7747/14/10/1449
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