De novo biosynthesis of quercetin in Yarrowia Lipolytica through systematic metabolic engineering for enhanced yield

Abstract Kaempferol and quercetin possess various biological activities, making them valuable in food and medicine. However, their production via traditional methods is often inefficient. This study aims to address this gap by engineering the yeast Yarrowia lipolytica to achieve high yields of these...

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Main Authors: Yuxing Dong, Wenping Wei, Mengfan Li, Tao Qian, Jiayun Xu, Xiaohe Chu, Bang-Ce Ye
Format: Article
Language:English
Published: SpringerOpen 2025-01-01
Series:Bioresources and Bioprocessing
Subjects:
Online Access:https://doi.org/10.1186/s40643-024-00825-w
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author Yuxing Dong
Wenping Wei
Mengfan Li
Tao Qian
Jiayun Xu
Xiaohe Chu
Bang-Ce Ye
author_facet Yuxing Dong
Wenping Wei
Mengfan Li
Tao Qian
Jiayun Xu
Xiaohe Chu
Bang-Ce Ye
author_sort Yuxing Dong
collection DOAJ
description Abstract Kaempferol and quercetin possess various biological activities, making them valuable in food and medicine. However, their production via traditional methods is often inefficient. This study aims to address this gap by engineering the yeast Yarrowia lipolytica to achieve high yields of these flavonoids. We designed a kaempferol biosynthetic pathway by integrating multiple-copy fusion enzyme expression modules, F3H-(GGGGS)2-FLS, into the genome with an optimized linker (GGGGS)2 to enhance kaempferol production from naringenin. To synthesize quercetin de novo, we introduced the FMOCPR gene into the kaempferol-synthesizing strain using the optimized pFBAin promoter. Notably, increasing glucose concentration effectively boosted the production of both flavonoids. Our results demonstrated kaempferol and quercetin titers reaching 194.30 ± 7.69 and 278.92 ± 11.58 mg/L, respectively, in shake-flask cultures. These findings suggest that Y. lipolytica is a promising platform for the efficient production of flavonoid-derived products.
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institution Kabale University
issn 2197-4365
language English
publishDate 2025-01-01
publisher SpringerOpen
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series Bioresources and Bioprocessing
spelling doaj-art-07f9daf94cc440a7a7ddb83344bf852b2025-01-26T12:12:34ZengSpringerOpenBioresources and Bioprocessing2197-43652025-01-0112111010.1186/s40643-024-00825-wDe novo biosynthesis of quercetin in Yarrowia Lipolytica through systematic metabolic engineering for enhanced yieldYuxing Dong0Wenping Wei1Mengfan Li2Tao Qian3Jiayun Xu4Xiaohe Chu5Bang-Ce Ye6Institute of Engineering Biology and Health, Collaborative Innovation Center of Yangtze River Delta Region Green Pharmaceuticals, College of Pharmaceutical Sciences, Zhejiang University of TechnologyInstitute of Engineering Biology and Health, Collaborative Innovation Center of Yangtze River Delta Region Green Pharmaceuticals, College of Pharmaceutical Sciences, Zhejiang University of TechnologyInstitute of Engineering Biology and Health, Collaborative Innovation Center of Yangtze River Delta Region Green Pharmaceuticals, College of Pharmaceutical Sciences, Zhejiang University of TechnologyInstitute of Engineering Biology and Health, Collaborative Innovation Center of Yangtze River Delta Region Green Pharmaceuticals, College of Pharmaceutical Sciences, Zhejiang University of TechnologyInstitute of Engineering Biology and Health, Collaborative Innovation Center of Yangtze River Delta Region Green Pharmaceuticals, College of Pharmaceutical Sciences, Zhejiang University of TechnologyInstitute of Engineering Biology and Health, Collaborative Innovation Center of Yangtze River Delta Region Green Pharmaceuticals, College of Pharmaceutical Sciences, Zhejiang University of TechnologyInstitute of Engineering Biology and Health, Collaborative Innovation Center of Yangtze River Delta Region Green Pharmaceuticals, College of Pharmaceutical Sciences, Zhejiang University of TechnologyAbstract Kaempferol and quercetin possess various biological activities, making them valuable in food and medicine. However, their production via traditional methods is often inefficient. This study aims to address this gap by engineering the yeast Yarrowia lipolytica to achieve high yields of these flavonoids. We designed a kaempferol biosynthetic pathway by integrating multiple-copy fusion enzyme expression modules, F3H-(GGGGS)2-FLS, into the genome with an optimized linker (GGGGS)2 to enhance kaempferol production from naringenin. To synthesize quercetin de novo, we introduced the FMOCPR gene into the kaempferol-synthesizing strain using the optimized pFBAin promoter. Notably, increasing glucose concentration effectively boosted the production of both flavonoids. Our results demonstrated kaempferol and quercetin titers reaching 194.30 ± 7.69 and 278.92 ± 11.58 mg/L, respectively, in shake-flask cultures. These findings suggest that Y. lipolytica is a promising platform for the efficient production of flavonoid-derived products.https://doi.org/10.1186/s40643-024-00825-wBiosynthesisYarrowia LipolyticaKaempferolQuercetinMetabolic engineering
spellingShingle Yuxing Dong
Wenping Wei
Mengfan Li
Tao Qian
Jiayun Xu
Xiaohe Chu
Bang-Ce Ye
De novo biosynthesis of quercetin in Yarrowia Lipolytica through systematic metabolic engineering for enhanced yield
Bioresources and Bioprocessing
Biosynthesis
Yarrowia Lipolytica
Kaempferol
Quercetin
Metabolic engineering
title De novo biosynthesis of quercetin in Yarrowia Lipolytica through systematic metabolic engineering for enhanced yield
title_full De novo biosynthesis of quercetin in Yarrowia Lipolytica through systematic metabolic engineering for enhanced yield
title_fullStr De novo biosynthesis of quercetin in Yarrowia Lipolytica through systematic metabolic engineering for enhanced yield
title_full_unstemmed De novo biosynthesis of quercetin in Yarrowia Lipolytica through systematic metabolic engineering for enhanced yield
title_short De novo biosynthesis of quercetin in Yarrowia Lipolytica through systematic metabolic engineering for enhanced yield
title_sort de novo biosynthesis of quercetin in yarrowia lipolytica through systematic metabolic engineering for enhanced yield
topic Biosynthesis
Yarrowia Lipolytica
Kaempferol
Quercetin
Metabolic engineering
url https://doi.org/10.1186/s40643-024-00825-w
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