Applications and challenges in designing VHH-based bispecific antibodies: leveraging machine learning solutions

The development of bispecific antibodies that bind at least two different targets relies on bringing together multiple binding domains with different binding properties and biophysical characteristics to produce a drug-like therapeutic. These building blocks play an important role in the overall qua...

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Main Authors: Michael Mullin, James McClory, Winston Haynes, Justin Grace, Nathan Robertson, Gino van Heeke
Format: Article
Language:English
Published: Taylor & Francis Group 2024-12-01
Series:mAbs
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Online Access:https://www.tandfonline.com/doi/10.1080/19420862.2024.2341443
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author Michael Mullin
James McClory
Winston Haynes
Justin Grace
Nathan Robertson
Gino van Heeke
author_facet Michael Mullin
James McClory
Winston Haynes
Justin Grace
Nathan Robertson
Gino van Heeke
author_sort Michael Mullin
collection DOAJ
description The development of bispecific antibodies that bind at least two different targets relies on bringing together multiple binding domains with different binding properties and biophysical characteristics to produce a drug-like therapeutic. These building blocks play an important role in the overall quality of the molecule and can influence many important aspects from potency and specificity to stability and half-life. Single-domain antibodies, particularly camelid-derived variable heavy domain of heavy chain (VHH) antibodies, are becoming an increasingly popular choice for bispecific construction due to their single-domain modularity, favorable biophysical properties, and potential to work in multiple antibody formats. Here, we review the use of VHH domains as building blocks in the construction of multispecific antibodies and the challenges in creating optimized molecules. In addition to exploring traditional approaches to VHH development, we review the integration of machine learning techniques at various stages of the process. Specifically, the utilization of machine learning for structural prediction, lead identification, lead optimization, and humanization of VHH antibodies.
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1942-0870
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spelling doaj-art-01baed59c39a4b3285f77233b47c5e3e2025-01-31T04:19:38ZengTaylor & Francis GroupmAbs1942-08621942-08702024-12-0116110.1080/19420862.2024.2341443Applications and challenges in designing VHH-based bispecific antibodies: leveraging machine learning solutionsMichael Mullin0James McClory1Winston Haynes2Justin Grace3Nathan Robertson4Gino van HeekeLabGenius, London, UKLabGenius, London, UKLabGenius, London, UKLabGenius, London, UKLabGenius, London, UKThe development of bispecific antibodies that bind at least two different targets relies on bringing together multiple binding domains with different binding properties and biophysical characteristics to produce a drug-like therapeutic. These building blocks play an important role in the overall quality of the molecule and can influence many important aspects from potency and specificity to stability and half-life. Single-domain antibodies, particularly camelid-derived variable heavy domain of heavy chain (VHH) antibodies, are becoming an increasingly popular choice for bispecific construction due to their single-domain modularity, favorable biophysical properties, and potential to work in multiple antibody formats. Here, we review the use of VHH domains as building blocks in the construction of multispecific antibodies and the challenges in creating optimized molecules. In addition to exploring traditional approaches to VHH development, we review the integration of machine learning techniques at various stages of the process. Specifically, the utilization of machine learning for structural prediction, lead identification, lead optimization, and humanization of VHH antibodies.https://www.tandfonline.com/doi/10.1080/19420862.2024.2341443Bayesian optimizationbispecificHCAbmachine learningmultispecificnanobody
spellingShingle Michael Mullin
James McClory
Winston Haynes
Justin Grace
Nathan Robertson
Gino van Heeke
Applications and challenges in designing VHH-based bispecific antibodies: leveraging machine learning solutions
mAbs
Bayesian optimization
bispecific
HCAb
machine learning
multispecific
nanobody
title Applications and challenges in designing VHH-based bispecific antibodies: leveraging machine learning solutions
title_full Applications and challenges in designing VHH-based bispecific antibodies: leveraging machine learning solutions
title_fullStr Applications and challenges in designing VHH-based bispecific antibodies: leveraging machine learning solutions
title_full_unstemmed Applications and challenges in designing VHH-based bispecific antibodies: leveraging machine learning solutions
title_short Applications and challenges in designing VHH-based bispecific antibodies: leveraging machine learning solutions
title_sort applications and challenges in designing vhh based bispecific antibodies leveraging machine learning solutions
topic Bayesian optimization
bispecific
HCAb
machine learning
multispecific
nanobody
url https://www.tandfonline.com/doi/10.1080/19420862.2024.2341443
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