Solving Multidimensional 0-1 Knapsack Problem with Time-Free Tissue P Systems by Xiangrong Liu, Ziming Li, Juan Suo, Ying Ju, Juan Liu, Xiangxiang Zeng

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HNF-DDA: subgraph contrastive-driven transformer-style heterogeneous network embedding for drug–disease association prediction by Yifan Shang, Zixu Wang, Yangyang Chen, Xinyu Yang, Zhonghao Ren, Xiangxiang Zeng, Lei Xu

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GraphGIM: rethinking molecular graph contrastive learning via geometry image modeling by Chaoyi Li, Hongxin Xiang, Wenjie Du, Tengfei Ma, Haowen Chen, Xiangxiang Zeng, Lei Xu

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Predicting rare drug-drug interaction events with dual-granular structure-adaptive and pair variational representation by Zhonghao Ren, Xiangxiang Zeng, Yizhen Lao, Zhuhong You, Yifan Shang, Quan Zou, Chen Lin

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Repeat and haplotype aware error correction in nanopore sequencing reads with DeChat by Yuansheng Liu, Yichen Li, Enlian Chen, Jialu Xu, Wenhai Zhang, Xiangxiang Zeng, Xiao Luo

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MultiCycPermea: accurate and interpretable prediction of cyclic peptide permeability using a multimodal image-sequence model by Zixu Wang, Yangyang Chen, Yifan Shang, Xiulong Yang, Wenqiong Pan, Xiucai Ye, Tetsuya Sakurai, Xiangxiang Zeng

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Interformer: an interaction-aware model for protein-ligand docking and affinity prediction by Houtim Lai, Longyue Wang, Ruiyuan Qian, Junhong Huang, Peng Zhou, Geyan Ye, Fandi Wu, Fang Wu, Xiangxiang Zeng, Wei Liu

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Interface-aware molecular generative framework for protein–protein interaction modulators by Jianmin Wang, Jiashun Mao, Chunyan Li, Hongxin Xiang, Xun Wang, Shuang Wang, Zixu Wang, Yangyang Chen, Yuquan Li, Kyoung Tai No, Tao Song, Xiangxiang Zeng

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Instruction multi-constraint molecular generation using a teacher-student large language model by Peng Zhou, Jianmin Wang, Chunyan Li, Zixu Wang, Yiping Liu, Siqi Sun, Jianxin Lin, Leyi Wei, Xibao Cai, Houtim Lai, Wei Liu, Longyue Wang, Yuansheng Liu, Xiangxiang Zeng

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