Whelk: An OWL EL+RL Reasoner Enabling New Use Cases by Balhoff, James P., Mungall, Christopher J.

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Psychogenic Nonepileptic Spells in Chronic Epilepsy Patients with Moderate Cognitive Impairment: The Need for Video EEG Monitoring for Adequate Diagnosis by Diana Mungall Robinson, Batool F. Kirmani

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Sporadic Hemiplegic Migraine with ATP1A2 and Prothrombin Gene Mutations by Jose Aceves, Diana Mungall, Batool F. Kirmani

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Prostaglandins, masculinization and its disorders: effects of fetal exposure of the rat to the cyclooxygenase inhibitor- indomethacin. by Afshan Dean, William Mungall, Chris McKinnell, Richard M Sharpe

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Genome-wide analysis of human disease alleles reveals that their locations are correlated in paralogous proteins. by Mark Yandell, Barry Moore, Fidel Salas, Chris Mungall, Andrew MacBride, Charles White, Martin G Reese

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A high-throughput pipeline for DNA/RNA/small RNA purification from tissue samples for sequencing by Jing Xu, Pawan K Pandoh, Richard D Corbett, Duane Smailus, Reanne Bowlby, Denise Brooks, Helen McDonald, Simon Haile, Sundeep Chahal, Steve Bilobram, Karen L Mungall, Andrew J Mungall, Robin Coope, Richard A Moore, Yongjun Zhao, Steven JM Jones, Marco A Marra

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Annotation of two large contiguous regions from the Haemonchus contortus genome using RNA-seq and comparative analysis with Caenorhabditis elegans. by Roz Laing, Martin Hunt, Anna V Protasio, Gary Saunders, Karen Mungall, Steven Laing, Frank Jackson, Michael Quail, Robin Beech, Matthew Berriman, John S Gilleard

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Efficient reinterpretation of rare disease cases using Exomiser by Letizia Vestito, Julius O. B. Jacobsen, Susan Walker, Valentina Cipriani, Nomi L. Harris, Melissa A. Haendel, Christopher J. Mungall, Peter Robinson, Damian Smedley

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Knowledge Beacons: Web services for data harvesting of distributed biomedical knowledge. by Lance M Hannestad, Vlado Dančík, Meera Godden, Imelda W Suen, Kenneth C Huellas-Bruskiewicz, Benjamin M Good, Christopher J Mungall, Richard M Bruskiewich

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Adaptable and comprehensive approaches for long-read nanopore sequencing of polyadenylated and non-polyadenylated RNAs by Simon Haile, Richard D. Corbett, Kieran O’Neill, Jing Xu, Duane E. Smailus, Pawan K. Pandoh, Anthony Bayega, Miruna Bala, Eric Chuah, Robin J. N. Coope, Richard A. Moore, Karen L. Mungall, Yongjun Zhao, Yussanne Ma, Marco A. Marra, Marco A. Marra, Steven J. M. Jones, Steven J. M. Jones, Andrew J. Mungall

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Chemical stability of levoglucosan: An isotopic perspective by X. F. Sang, I. Gensch, B. Kammer, A. Khan, E. Kleist, W. Laumer, P. Schlag, S. H. Schmitt, J. Wildt, R. Zhao, E. L. Mungall, J. P. D. Abbatt, A. Kiendler‐Scharr

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Proteomics and personalized PDX models identify treatment for a progressive malignancy within an actionable timeframe by Georgina D Barnabas, Tariq A Bhat, Verena Goebeler, Pascal Leclair, Nadine Azzam, Nicole Melong, Colleen Anderson, Alexis Gom, Seohee An, Enes K Ergin, Yaoqing Shen, Agustina Conrrero, Andrew J Mungall, Karen L Mungall, Christopher A Maxwell, Gregor S D Reid, Martin Hirst, Steven Jones, Jennifer A Chan, Donna L Senger, Jason N Berman, Seth J Parker, Jonathan W Bush, Caron Strahlendorf, Rebecca J Deyell, C James Lim, Philipp F Lange

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The evolution of the DLK1-DIO3 imprinted domain in mammals. by Carol A Edwards, Andrew J Mungall, Lucy Matthews, Edward Ryder, Dionne J Gray, Andrew J Pask, Geoffrey Shaw, Jennifer A M Graves, Jane Rogers, SAVOIR consortium, Ian Dunham, Marilyn B Renfree, Anne C Ferguson-Smith

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The Vertebrate Breed Ontology: Toward Effective Breed Data Standardization by Kathleen R. Mullen, Imke Tammen, Nicolas A. Matentzoglu, Marius Mather, James P. Balhoff, Elizabeth Esdaile, Gregoire Leroy, Carissa A. Park, Halie M. Rando, Nadia T. Saklou, Tracy L. Webb, Nicole A. Vasilevsky, Christopher J. Mungall, Melissa A. Haendel, Frank W. Nicholas, Sabrina Toro

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Towards a standard benchmark for phenotype-driven variant and gene prioritisation algorithms: PhEval - Phenotypic inference Evaluation framework by Yasemin Bridges, Vinicius de Souza, Katherina G. Cortes, Melissa Haendel, Nomi L. Harris, Daniel R. Korn, Nikolaos M. Marinakis, Nicolas Matentzoglu, James A. McLaughlin, Christopher J. Mungall, Aaron Odell, David Osumi-Sutherland, Peter N. Robinson, Damian Smedley, Julius O. B. Jacobsen

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Phenopacket-tools: Building and validating GA4GH Phenopackets. by Daniel Danis, Julius O B Jacobsen, Alex H Wagner, Tudor Groza, Martha A Beckwith, Lauren Rekerle, Leigh C Carmody, Justin Reese, Harshad Hegde, Markus S Ladewig, Berthold Seitz, Monica Munoz-Torres, Nomi L Harris, Jordi Rambla, Michael Baudis, Christopher J Mungall, Melissa A Haendel, Peter N Robinson

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Telomeric expression sites are highly conserved in Trypanosoma brucei. by Christiane Hertz-Fowler, Luisa M Figueiredo, Michael A Quail, Marion Becker, Andrew Jackson, Nathalie Bason, Karen Brooks, Carol Churcher, Samah Fahkro, Ian Goodhead, Paul Heath, Magdalena Kartvelishvili, Karen Mungall, David Harris, Heidi Hauser, Mandy Sanders, David Saunders, Kathy Seeger, Sarah Sharp, Jesse E Taylor, Danielle Walker, Brian White, Rosanna Young, George A M Cross, Gloria Rudenko, J David Barry, Edward J Louis, Matthew Berriman

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Serelaxin as a potential treatment for renal dysfunction in cirrhosis: Preclinical evaluation and results of a randomized phase 2 trial. by Victoria K Snowdon, Neil J Lachlan, Anna M Hoy, Patrick W F Hadoke, Scott I Semple, Dilip Patel, Will Mungall, Timothy J Kendall, Adrian Thomson, Ross J Lennen, Maurits A Jansen, Carmel M Moran, Antonella Pellicoro, Prakash Ramachandran, Isaac Shaw, Rebecca L Aucott, Thomas Severin, Rajnish Saini, Judy Pak, Denise Yates, Neelesh Dongre, Jeremy S Duffield, David J Webb, John P Iredale, Peter C Hayes, Jonathan A Fallowfield

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Genomic evidence for the evolution of Streptococcus equi: host restriction, increased virulence, and genetic exchange with human pathogens. by Matthew T G Holden, Zoe Heather, Romain Paillot, Karen F Steward, Katy Webb, Fern Ainslie, Thibaud Jourdan, Nathalie C Bason, Nancy E Holroyd, Karen Mungall, Michael A Quail, Mandy Sanders, Mark Simmonds, David Willey, Karen Brooks, David M Aanensen, Brian G Spratt, Keith A Jolley, Martin C J Maiden, Michael Kehoe, Neil Chanter, Stephen D Bentley, Carl Robinson, Duncan J Maskell, Julian Parkhill, Andrew S Waller

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Dynamic Retrieval Augmented Generation of Ontologies using Artificial Intelligence (DRAGON-AI) by Sabrina Toro, Anna V. Anagnostopoulos, Susan M. Bello, Kai Blumberg, Rhiannon Cameron, Leigh Carmody, Alexander D. Diehl, Damion M. Dooley, William D. Duncan, Petra Fey, Pascale Gaudet, Nomi L. Harris, Marcin P. Joachimiak, Leila Kiani, Tiago Lubiana, Monica C. Munoz-Torres, Shawn O‘Neil, David Osumi-Sutherland, Aleix Puig-Barbe, Justin T. Reese, Leonore Reiser, Sofia MC. Robb, Troy Ruemping, James Seager, Eric Sid, Ray Stefancsik, Magalie Weber, Valerie Wood, Melissa A. Haendel, Christopher J. Mungall

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