Integrative multi-omics module network inference with Lemon-Tree. by Eric Bonnet, Laurence Calzone, Tom Michoel

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An Algorithm to Automatically Generate the Combinatorial Orbit Counting Equations. by Ine Melckenbeeck, Pieter Audenaert, Tom Michoel, Didier Colle, Mario Pickavet

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The index-based subgraph matching algorithm (ISMA): fast subgraph enumeration in large networks using optimized search trees. by Sofie Demeyer, Tom Michoel, Jan Fostier, Pieter Audenaert, Mario Pickavet, Piet Demeester

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Prediction of causal genes at GWAS loci with pleiotropic gene regulatory effects using sets of correlated instrumental variables. by Mariyam Khan, Adriaan-Alexander Ludl, Sean Bankier, Johan L M Björkegren, Tom Michoel

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Plasma cholesterol-induced lesion networks activated before regression of early, mature, and advanced atherosclerosis. by Johan L M Björkegren, Sara Hägg, Husain A Talukdar, Hassan Foroughi Asl, Rajeev K Jain, Cecilia Cedergren, Ming-Mei Shang, Aránzazu Rossignoli, Rabbe Takolander, Olle Melander, Anders Hamsten, Tom Michoel, Josefin Skogsberg

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