The past and future of tuberculosis research. by Iñaki Comas, Sebastien Gagneux

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Human macrophage responses to clinical isolates from the Mycobacterium tuberculosis complex discriminate between ancient and modern lineages. by Damien Portevin, Sébastien Gagneux, Iñaki Comas, Douglas Young

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Mycobacterium africanum--review of an important cause of human tuberculosis in West Africa. by Bouke C de Jong, Martin Antonio, Sebastien Gagneux

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Genotyping of genetically monomorphic bacteria: DNA sequencing in Mycobacterium tuberculosis highlights the limitations of current methodologies. by Iñaki Comas, Susanne Homolka, Stefan Niemann, Sebastien Gagneux

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Soluble immune mediators orchestrate protective in vitro granulomatous responses across Mycobacterium tuberculosis complex lineages by Ainhoa Arbués, Sarah Schmidiger, Miriam Reinhard, Sonia Borrell, Sebastien Gagneux, Damien Portevin

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Linking genetic and phenotypic bedaquiline resistance in Mycobacterium tuberculosis strains from Georgia. by Nino Maghradze, Chloé Loiseau, Galo Adrian Goig, Nino Bablishvili, Levan Jugheli, Sonia Borrell, Nestani Tukvadze, Russell Ryan Kempker, Zaza Avaliani, Sebastien Gagneux

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Linking genetic and phenotypic bedaquiline resistance in Mycobacterium tuberculosis strains from Georgia by Nino Maghradze, Chloé Loiseau, Galo Adrian Goig, Nino Bablishvili, Levan Jugheli, Sonia Borrell, Nestani Tukvadze, Russell Ryan Kempker, Zaza Avaliani, Sebastien Gagneux

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High functional diversity in Mycobacterium tuberculosis driven by genetic drift and human demography. by Ruth Hershberg, Mikhail Lipatov, Peter M Small, Hadar Sheffer, Stefan Niemann, Susanne Homolka, Jared C Roach, Kristin Kremer, Dmitri A Petrov, Marcus W Feldman, Sebastien Gagneux

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Drug-induced differential culturability in diverse strains of Mycobacterium tuberculosis by Valerie F. A. March, Nino Maghradze, Kakha Mchedlishvili, Teona Avaliani, Rusudan Aspindzelashvili, Zaza Avaliani, Maia Kipiani, Nestani Tukvadze, Levan Jugheli, Selim Bouaouina, Anna Doetsch, Galo A. Goig, Sebastien Gagneux, Sonia Borrell

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Genotypic and phenotypic diversity of Mycobacterium tuberculosis complex genotypes prevalent in West Africa. by Stephen Osei-Wusu, Isaac Darko Otchere, Portia Morgan, Abdul Basit Musah, Ishaque Mintah Siam, Diana Asandem, Theophilus Afum, Prince Asare, Adwoa Asante-Poku, Kwadwo Asamoah Kusi, Sebastien Gagneux, Dorothy Yeboah-Manu

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Influence of M. tuberculosis lineage variability within a clinical trial for pulmonary tuberculosis. by Payam Nahid, Erin E Bliven, Elizabeth Y Kim, William R Mac Kenzie, Jason E Stout, Lois Diem, John L Johnson, Sebastien Gagneux, Philip C Hopewell, Midori Kato-Maeda, Tuberculosis Trials Consortium

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The genome of Mycobacterium africanum West African 2 reveals a lineage-specific locus and genome erosion common to the M. tuberculosis complex. by Stephen D Bentley, Iñaki Comas, Josephine M Bryant, Danielle Walker, Noel H Smith, Simon R Harris, Scott Thurston, Sebastien Gagneux, Jonathan Wood, Martin Antonio, Michael A Quail, Florian Gehre, Richard A Adegbola, Julian Parkhill, Bouke C de Jong

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Genomic diversity among drug sensitive and multidrug resistant isolates of Mycobacterium tuberculosis with identical DNA fingerprints. by Stefan Niemann, Claudio U Köser, Sebastien Gagneux, Claudia Plinke, Susanne Homolka, Helen Bignell, Richard J Carter, R Keira Cheetham, Anthony Cox, Niall A Gormley, Paula Kokko-Gonzales, Lisa J Murray, Roberto Rigatti, Vincent P Smith, Felix P M Arends, Helen S Cox, Geoff Smith, John A C Archer

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Genome-to-genome analysis reveals associations between human and mycobacterial genetic variation in tuberculosis patients from Tanzania by Zhi Ming Xu, Michaela Zwyer, Hellen Hiza, Sarah Schmidiger, Mohamed Sasamalo, Miriam Reinhard, Anna Doetsch, Sonia Borrell, Olivier Naret, Sina Rüeger, Dylan Lawless, Simon Tang, Faima Isihaka, Hosiana Temba, Thomas Maroa, Rastard Naftari, Christian Beisel, Jerry Hella, Klaus Reither, Daniela Brites, Damien Portevin, Sebastien Gagneux, Jacques Fellay

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