Ruedi Aebersold
Aebersold is known for the development and application of targeted proteomics techniques in the field of biomedical research, in order to understand the function, interaction and localization of each protein in the cell and its changes in disease states. To this end, Ruedi Abersold has made significant contributions in the development and application of targeted proteomics methods, including selected reaction monitoring and data-independent acquisition. Ruedi Aebersold is also recognized for its contributions in the development of standard formats and open source software for the analysis and storage of mass spectrometry and proteomics data, and he is one of the inventors of the Isotope-Coded Affinity Tag (ICAT) technique for quantitative proteomics, a technique that measures the relative quantities of proteins between two sample by using tags containing stable isotopes of different masses.
Aebersold is co-founder and scientific advisor of the companies ProteoMediX and Biognosys. Provided by Wikipedia
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The interdependence of transcript and protein abundance: new data–new complexities by Yansheng Liu, Ruedi Aebersold
Published 2016-01-01Get full text
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Selected reaction monitoring for quantitative proteomics: a tutorial by Vinzenz Lange, Paola Picotti, Bruno Domon, Ruedi Aebersold
Published 2008-10-01Get full text
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Regulation of yeast central metabolism by enzyme phosphorylation by Ana Paula Oliveira, Christina Ludwig, Paola Picotti, Maria Kogadeeva, Ruedi Aebersold, Uwe Sauer
Published 2012-11-01Get full text
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Timescales and bottlenecks in miRNA‐dependent gene regulation by Jean Hausser, Afzal Pasha Syed, Nathalie Selevsek, Erik van Nimwegen, Lukasz Jaskiewicz, Ruedi Aebersold, Mihaela Zavolan
Published 2013-12-01Get full text
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Targeted proteomics reveals strain‐specific changes in the mouse insulin and central metabolic pathways after a sustained high‐fat diet by Eduard Sabidó, Yibo Wu, Lucia Bautista, Thomas Porstmann, Ching‐Yun Chang, Olga Vitek, Markus Stoffel, Ruedi Aebersold
Published 2013-07-01Get full text
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Temporal system‐level organization of the switch from glycolytic to gluconeogenic operation in yeast by Guillermo G Zampar, Anne Kümmel, Jennifer Ewald, Stefan Jol, Bastian Niebel, Paola Picotti, Ruedi Aebersold, Uwe Sauer, Nicola Zamboni, Matthias Heinemann
Published 2013-04-01Get full text
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Elucidating essential kinases of endothelin signalling by logic modelling of phosphoproteomics data by Alexander Schäfer, Enio Gjerga, Richard WD Welford, Imke Renz, Francois Lehembre, Peter MA Groenen, Julio Saez‐Rodriguez, Ruedi Aebersold, Matthias Gstaiger
Published 2019-08-01Get full text
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Genetic effects on molecular network states explain complex traits by Matthias Weith, Jan Großbach, Mathieu Clement‐Ziza, Ludovic Gillet, María Rodríguez‐López, Samuel Marguerat, Christopher T Workman, Paola Picotti, Jürg Bähler, Ruedi Aebersold, Andreas Beyer
Published 2023-07-01Get full text
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Depletion-dependent activity-based protein profiling using SWATH/DIA-MS detects serine hydrolase lipid remodeling in lung adenocarcinoma progression by Tatjana Sajic, Matej Vizovišek, Stephan Arni, Rodolfo Ciuffa, Martin Mehnert, Sébastien Lenglet, Walter Weder, Hector Gallart-Ayala, Julijana Ivanisevic, Marija Buljan, Aurelien Thomas, Sven Hillinger, Ruedi Aebersold
Published 2025-05-01Get full text
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Phosphorylation‐linked complex profiling identifies assemblies required for Hippo signal integration by Federico Uliana, Rodolfo Ciuffa, Ranjan Mishra, Andrea Fossati, Fabian Frommelt, Sabrina Keller, Martin Mehnert, Eivind Salmorin Birkeland, Frank van Drogen, Nevena Srejic, Matthias Peter, Nicolas Tapon, Ruedi Aebersold, Matthias Gstaiger
Published 2023-03-01Get full text
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From coarse to fine: the absolute Escherichia coli proteome under diverse growth conditions by Matteo Mori, Zhongge Zhang, Amir Banaei‐Esfahani, Jean‐Benoît Lalanne, Hiroyuki Okano, Ben C Collins, Alexander Schmidt, Olga T Schubert, Deok‐Sun Lee, Gene‐Wei Li, Ruedi Aebersold, Terence Hwa, Christina Ludwig
Published 2021-05-01Get full text
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Phosphoproteomic analyses reveal novel cross‐modulation mechanisms between two signaling pathways in yeast by Stefania Vaga, Marti Bernardo‐Faura, Thomas Cokelaer, Alessio Maiolica, Christopher A Barnes, Ludovic C Gillet, Björn Hegemann, Frank van Drogen, Hoda Sharifian, Edda Klipp, Matthias Peter, Julio Saez‐Rodriguez, Ruedi Aebersold
Published 2014-12-01Get full text
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PhosphoPep—a phosphoproteome resource for systems biology research in Drosophila Kc167 cells by Bernd Bodenmiller, Johan Malmstrom, Bertran Gerrits, David Campbell, Henry Lam, Alexander Schmidt, Oliver Rinner, Lukas N Mueller, Paul T Shannon, Patrick G Pedrioli, Christian Panse, Hoo‐Keun Lee, Ralph Schlapbach, Ruedi Aebersold
Published 2007-10-01Get full text
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The impact of genomic variation on protein phosphorylation states and regulatory networks by Jan Grossbach, Ludovic Gillet, Mathieu Clément‐Ziza, Corinna L Schmalohr, Olga T Schubert, Maximilian Schütter, Julia S P Mawer, Christopher A Barnes, Isabell Bludau, Matthias Weith, Peter Tessarz, Martin Graef, Ruedi Aebersold, Andreas Beyer
Published 2022-05-01Get full text
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Diagnostics and correction of batch effects in large‐scale proteomic studies: a tutorial by Jelena Čuklina, Chloe H Lee, Evan G Williams, Tatjana Sajic, Ben C Collins, María Rodríguez Martínez, Varun S Sharma, Fabian Wendt, Sandra Goetze, Gregory R Keele, Bernd Wollscheid, Ruedi Aebersold, Patrick G A Pedrioli
Published 2021-08-01Get full text
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