Real-time estimation of the epidemic reproduction number: Scoping review of the applications and challenges. by Rebecca K Nash, Pierre Nouvellet, Anne Cori

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Estimating the epidemic reproduction number from temporally aggregated incidence data: A statistical modelling approach and software tool. by Rebecca K Nash, Samir Bhatt, Anne Cori, Pierre Nouvellet

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Comparison of machine learning methods for estimating case fatality ratios: An Ebola outbreak simulation study. by Alpha Forna, Ilaria Dorigatti, Pierre Nouvellet, Christl A Donnelly

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Evaluation of global outbreak surveillance performance for high pathogenicity avian influenza and African swine fever by Younjung Kim, Guillaume Fournié, Paolo Tizzani, Gregorio Torres, Raphaëlle Métras, Dirk Pfeiffer, Pierre Nouvellet

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Spatial and temporal invasion dynamics of the 2014-2017 Zika and chikungunya epidemics in Colombia. by Kelly Charniga, Zulma M Cucunubá, Marcela Mercado, Franklyn Prieto, Martha Ospina, Pierre Nouvellet, Christl A Donnelly

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Descriptive analysis of surveillance data for Zika virus disease and Zika virus-associated neurological complications in Colombia, 2015-2017. by Kelly Charniga, Zulma M Cucunubá, Diana M Walteros, Marcela Mercado, Franklyn Prieto, Martha Ospina, Pierre Nouvellet, Christl A Donnelly

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Linear and Machine Learning modelling for spatiotemporal disease predictions: Force-of-Infection of Chagas disease. by Julia Ledien, Zulma M Cucunubá, Gabriel Parra-Henao, Eliana Rodríguez-Monguí, Andrew P Dobson, Susana B Adamo, María-Gloria Basáñez, Pierre Nouvellet

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Revealing the Micro-scale Signature of Endemic Zoonotic Disease Transmission in an African Urban Setting. by Hervé Bourhy, Emmanuel Nakouné, Matthew Hall, Pierre Nouvellet, Anthony Lepelletier, Chiraz Talbi, Laurence Watier, Edward C Holmes, Simon Cauchemez, Philippe Lemey, Christl A Donnelly, Andrew Rambaut

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Rabies and canine distemper virus epidemics in the red fox population of northern Italy (2006-2010). by Pierre Nouvellet, Christl A Donnelly, Marco De Nardi, Chris J Rhodes, Paola De Benedictis, Carlo Citterio, Federica Obber, Monica Lorenzetto, Manuela Dalla Pozza, Simon Cauchemez, Giovanni Cattoli

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Retrospective evaluation of real-time estimates of global COVID-19 transmission trends and mortality forecasts. by Sangeeta Bhatia, Kris V Parag, Jack Wardle, Rebecca K Nash, Natsuko Imai, Sabine L Van Elsland, Britta Lassmann, John S Brownstein, Angel Desai, Mark Herringer, Kara Sewalk, Sarah Claire Loeb, John Ramatowski, Gina Cuomo-Dannenburg, Elita Jauneikaite, H Juliette T Unwin, Steven Riley, Neil Ferguson, Christl A Donnelly, Anne Cori, Pierre Nouvellet

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Two decades of Lloviu virus in Europe: knowns and unknowns about the European filovirus by Dr Gábor Kemenesi, Dr Zsófia Lanszki, Ágota Ábrahám, Dr Sándor A Boldogh, Dr Simon Scott, professor Nigel Temperton, Dr Edward Wright, Dr Pierre Nouvellet, Dr Stefania Leopardi, Dr Paola Di Benedictis, Dr Adam Hume, Dr Elke Mühlberger, Levente Sipos-Szabó, Dr Dávid Bajusz, Dr Heliana Dundarova, Dr Szilárd L Bücs, Dr Branka Bajić, Dr Ivana Budinski, Dr Štefan Matis, Dr Tamás Görföl

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Exposure Patterns Driving Ebola Transmission in West Africa: A Retrospective Observational Study. by International Ebola Response Team, Junerlyn Agua-Agum, Archchun Ariyarajah, Bruce Aylward, Luke Bawo, Pepe Bilivogui, Isobel M Blake, Richard J Brennan, Amy Cawthorne, Eilish Cleary, Peter Clement, Roland Conteh, Anne Cori, Foday Dafae, Benjamin Dahl, Jean-Marie Dangou, Boubacar Diallo, Christl A Donnelly, Ilaria Dorigatti, Christopher Dye, Tim Eckmanns, Mosoka Fallah, Neil M Ferguson, Lena Fiebig, Christophe Fraser, Tini Garske, Lice Gonzalez, Esther Hamblion, Nuha Hamid, Sara Hersey, Wes Hinsley, Amara Jambei, Thibaut Jombart, David Kargbo, Sakoba Keita, Michael Kinzer, Fred Kuti George, Beatrice Godefroy, Giovanna Gutierrez, Niluka Kannangarage, Harriet L Mills, Thomas Moller, Sascha Meijers, Yasmine Mohamed, Oliver Morgan, Gemma Nedjati-Gilani, Emily Newton, Pierre Nouvellet, Tolbert Nyenswah, William Perea, Devin Perkins, Steven Riley, Guenael Rodier, Marc Rondy, Maria Sagrado, Camelia Savulescu, Ilana J Schafer, Dirk Schumacher, Thomas Seyler, Anita Shah, Maria D Van Kerkhove, C Samford Wesseh, Zabulon Yoti

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