Characterization of within-host Plasmodium falciparum diversity using next-generation sequence data. by Sarah Auburn, Susana Campino, Olivo Miotto, Abdoulaye A Djimde, Issaka Zongo, Magnus Manske, Gareth Maslen, Valentina Mangano, Daniel Alcock, Bronwyn MacInnis, Kirk A Rockett, Taane G Clark, Ogobara K Doumbo, Jean Bosco Ouédraogo, Dominic P Kwiatkowski

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Drug-resistant genotypes and multi-clonality in Plasmodium falciparum analysed by direct genome sequencing from peripheral blood of malaria patients. by Timothy Robinson, Susana G Campino, Sarah Auburn, Samuel A Assefa, Spencer D Polley, Magnus Manske, Bronwyn MacInnis, Kirk A Rockett, Gareth L Maslen, Mandy Sanders, Michael A Quail, Peter L Chiodini, Dominic P Kwiatkowski, Taane G Clark, Colin J Sutherland

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Population genomic scan for candidate signatures of balancing selection to guide antigen characterization in malaria parasites. by Alfred Amambua-Ngwa, Kevin K A Tetteh, Magnus Manske, Natalia Gomez-Escobar, Lindsay B Stewart, M Elizabeth Deerhake, Ian H Cheeseman, Christopher I Newbold, Anthony A Holder, Ellen Knuepfer, Omar Janha, Muminatou Jallow, Susana Campino, Bronwyn Macinnis, Dominic P Kwiatkowski, David J Conway

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An effective method to purify Plasmodium falciparum DNA directly from clinical blood samples for whole genome high-throughput sequencing. by Sarah Auburn, Susana Campino, Taane G Clark, Abdoulaye A Djimde, Issaka Zongo, Robert Pinches, Magnus Manske, Valentina Mangano, Daniel Alcock, Elisa Anastasi, Gareth Maslen, Bronwyn Macinnis, Kirk Rockett, David Modiano, Christopher I Newbold, Ogobara K Doumbo, Jean Bosco Ouédraogo, Dominic P Kwiatkowski

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Effective preparation of Plasmodium vivax field isolates for high-throughput whole genome sequencing. by Sarah Auburn, Jutta Marfurt, Gareth Maslen, Susana Campino, Valentin Ruano Rubio, Magnus Manske, Barbara Machunter, Enny Kenangalem, Rintis Noviyanti, Leily Trianty, Boni Sebayang, Grennady Wirjanata, Kanlaya Sriprawat, Daniel Alcock, Bronwyn Macinnis, Olivo Miotto, Taane G Clark, Bruce Russell, Nicholas M Anstey, François Nosten, Dominic P Kwiatkowski, Ric N Price

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Estimating Geographical Variation in the Risk of Zoonotic Plasmodium knowlesi Infection in Countries Eliminating Malaria. by Freya M Shearer, Zhi Huang, Daniel J Weiss, Antoinette Wiebe, Harry S Gibson, Katherine E Battle, David M Pigott, Oliver J Brady, Chaturong Putaporntip, Somchai Jongwutiwes, Yee Ling Lau, Magnus Manske, Roberto Amato, Iqbal R F Elyazar, Indra Vythilingam, Samir Bhatt, Peter W Gething, Balbir Singh, Nick Golding, Simon I Hay, Catherine L Moyes

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A genome wide association study of Plasmodium falciparum susceptibility to 22 antimalarial drugs in Kenya. by Jason P Wendler, John Okombo, Roberto Amato, Olivo Miotto, Steven M Kiara, Leah Mwai, Lewa Pole, John O'Brien, Magnus Manske, Dan Alcock, Eleanor Drury, Mandy Sanders, Samuel O Oyola, Cinzia Malangone, Dushyanth Jyothi, Alistair Miles, Kirk A Rockett, Bronwyn L MacInnis, Kevin Marsh, Philip Bejon, Alexis Nzila, Dominic P Kwiatkowski

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