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Reply to “Do genome‐scale models need exact solvers or clearer standards?” by Leonid Chindelevitch, Jason Trigg, Aviv Regev, Bonnie Berger
Published 2015-10-01Get full text
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Quantitative prediction of disinfectant tolerance in Listeria monocytogenes using whole genome sequencing and machine learning by Alexander Gmeiner, Mirena Ivanova, Patrick Murigu Kamau Njage, Lisbeth Truelstrup Hansen, Leonid Chindelevitch, Pimlapas Leekitcharoenphon
Published 2025-03-01Get full text
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Antimicrobial resistance in Campylobacter spp. focussing on C. jejuni and C. coli – A narrative review by Vathsala Mohan, Nikolaos Strepis, Konstantinos Mitsakakis, Karsten Becker, Leonid Chindelevitch, Nirajmohan Shivaperumal, Khine Swe Swe-Han, John P. Hays
Published 2025-06-01Get full text
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Multivariable regression models improve accuracy and sensitive grading of antibiotic resistance mutations in Mycobacterium tuberculosis by Sanjana G. Kulkarni, Sacha Laurent, Paolo Miotto, Timothy M. Walker, Leonid Chindelevitch, Carl-Michael Nathanson, Nazir Ismail, Timothy C. Rodwell, Maha R. Farhat
Published 2025-03-01Get full text
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All parts of the WHO Mycobacterium tuberculosis mutation catalog need to be applied when evaluating its performance by Sacha Laurent, Jody E. Phelan, Leonid Chindelevitch, Timothy M. Walker, Daniela M. Cirillo, Anita Suresh, Timothy C. Rodwell, Paolo Miotto, Claudio U. Köser
Published 2025-05-01Get full text
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BenchAMRking: a Galaxy-based platform for illustrating the major issues associated with current antimicrobial resistance (AMR) gene prediction workflows by Nikolaos Strepis, Dennis Dollee, Donny Vrins, Kevin Vanneste, Bert Bogaerts, Catherine Carrillo, Amrita Bharat, Kristy Horan, Norelle L. Sherry, Torsten Seemann, Benjamin P. Howden, Saskia Hiltemann, Leonid Chindelevitch, Andrew P. Stubbs, John P. Hays
Published 2025-01-01Get full text
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