Pan-genome-scale metabolic modeling of Bacillus subtilis reveals functionally distinct groups by Maxwell Neal, William Brakewood, Michael Betenbaugh, Karsten Zengler

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Absolute quantification of the living skin microbiome overcomes relic-DNA bias and reveals specific patterns across volunteers by Deepan Thiruppathy, Oriane Moyne, Clarisse Marotz, Michael Williams, Perris Navarro, Livia Zaramela, Karsten Zengler

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A streamlined ribosome profiling protocol for the characterization of microorganisms by Haythem Latif, Richard Szubin, Justin Tan, Elizabeth Brunk, Anna Lechner, Karsten Zengler, Bernhard O. Palsson

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Model of metabolism and gene expression predicts proteome allocation in Pseudomonas putida by Juan D. Tibocha-Bonilla, Vishant Gandhi, Chloe Lieng, Oriane Moyne, Rodrigo Santibáñez-Palominos, Karsten Zengler

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Determining the control circuitry of redox metabolism at the genome-scale. by Stephen Federowicz, Donghyuk Kim, Ali Ebrahim, Joshua Lerman, Harish Nagarajan, Byung-kwan Cho, Karsten Zengler, Bernhard Palsson

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A genome-scale metabolic model for the denitrifying bacterium Thauera sp. MZ1T accurately predicts degradation of pollutants and production of polymers. by Diego Tec-Campos, Juan D Tibocha-Bonilla, Celina Jiang, Anurag Passi, Deepan Thiruppathy, Cristal Zuñiga, Camila Posadas, Alejandro Zepeda, Karsten Zengler

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Constraint-based modeling of carbon fixation and the energetics of electron transfer in Geobacter metallireducens. by Adam M Feist, Harish Nagarajan, Amelia-Elena Rotaru, Pier-Luc Tremblay, Tian Zhang, Kelly P Nevin, Derek R Lovley, Karsten Zengler

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Current state of microbiota clinical applications in neonatal and pediatric bacterial infections by Thanh Thien Le, Tram Ngoc Hoang, Dylan Huy Do, Xuan-Hung Nguyen, Cynthia Huynh, Hang Dao Viet, Vu Quoc Dat, Karsten Zengler, Jack A. Gilbert, Sean N. Avedissian, Tri Minh Tran, Jennifer Le

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Spatial chemistry of citrus reveals molecules bactericidal to Candidatus Liberibacter asiaticus by Alexander A. Aksenov, Alex Blacutt, Nichole Ginnan, Philippe E. Rolshausen, Alexey V. Melnik, Ali Lotfi, Emily C. Gentry, Manikandan Ramasamy, Cristal Zuniga, Karsten Zengler, Kranthi K. Mandadi, Greg McCollum, Pieter C. Dorrestein, M. Caroline Roper

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SARS-CoV-2 infectivity can be modulated through bacterial grooming of the glycocalyx by Cameron Martino, Benjamin P. Kellman, Daniel R. Sandoval, Thomas Mandel Clausen, Robert Cooper, Alhosna Benjdia, Feryel Soualmia, Alex E. Clark, Aaron F. Garretson, Clarisse A. Marotz, Se Jin Song, Stephen Wandro, Livia S. Zaramela, Rodolfo A. Salido, Qiyun Zhu, Erick Armingol, Yoshiki Vázquez-Baeza, Daniel McDonald, James T. Sorrentino, Bryn Taylor, Pedro Belda-Ferre, Promi Das, Farhana Ali, Chenguang Liang, Yujie Zhang, Luca Schifanella, Alice Covizzi, Alessia Lai, Agostino Riva, Christopher Basting, Courtney Ann Broedlow, Aki S. Havulinna, Pekka Jousilahti, Mehrbod Estaki, Tomasz Kosciolek, Rayus Kuplicki, Teresa A. Victor, Martin P. Paulus, Kristen E. Savage, Jennifer L. Benbow, Emma S. Spielfogel, Cheryl A. M. Anderson, Maria Elena Martinez, James V. Lacey, Shi Huang, Niina Haiminen, Laxmi Parida, Ho-Cheol Kim, Jack A. Gilbert, Daniel A. Sweeney, Sarah M. Allard, Austin D. Swafford, Susan Cheng, Michael Inouye, Teemu Niiranen, Mohit Jain, Veikko Salomaa, Karsten Zengler, Nichole R. Klatt, Jeff Hasty, Olivier Berteau, Aaron F. Carlin, Jeffrey D. Esko, Nathan E. Lewis, Rob Knight

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