High heritability is compatible with the broad distribution of set point viral load in HIV carriers. by Sebastian Bonhoeffer, Christophe Fraser, Gabriel E Leventhal

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Transmission selects for HIV-1 strains of intermediate virulence: a modelling approach. by George Shirreff, Lorenzo Pellis, Oliver Laeyendecker, Christophe Fraser

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Effect of the Latent Reservoir on the Evolution of HIV at the Within- and Between-Host Levels. by Hilje M Doekes, Christophe Fraser, Katrina A Lythgoe

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Large Variations in HIV-1 Viral Load Explained by Shifting-Mosaic Metapopulation Dynamics. by Katrina A Lythgoe, François Blanquart, Lorenzo Pellis, Christophe Fraser

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How the dynamics and structure of sexual contact networks shape pathogen phylogenies. by Katy Robinson, Nick Fyson, Ted Cohen, Christophe Fraser, Caroline Colijn

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Phylodynamic inference and model assessment with approximate bayesian computation: influenza as a case study. by Oliver Ratmann, Gé Donker, Adam Meijer, Christophe Fraser, Katia Koelle

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Impact and Cost-Effectiveness of Point-Of-Care CD4 Testing on the HIV Epidemic in South Africa. by Alastair Heffernan, Ella Barber, Ranjeeta Thomas, Christophe Fraser, Michael Pickles, Anne Cori

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Bayesian reconstruction of disease outbreaks by combining epidemiologic and genomic data. by Thibaut Jombart, Anne Cori, Xavier Didelot, Simon Cauchemez, Christophe Fraser, Neil Ferguson

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Horizontal DNA Transfer Mechanisms of Bacteria as Weapons of Intragenomic Conflict. by Nicholas J Croucher, Rafal Mostowy, Christopher Wymant, Paul Turner, Stephen D Bentley, Christophe Fraser

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HIV treatment as prevention: debate and commentary--will early infection compromise treatment-as-prevention strategies? by Myron S Cohen, Christopher Dye, Christophe Fraser, William C Miller, Kimberly A Powers, Brian G Williams

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Heterogeneity in the frequency and characteristics of homologous recombination in pneumococcal evolution. by Rafal Mostowy, Nicholas J Croucher, William P Hanage, Simon R Harris, Stephen Bentley, Christophe Fraser

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Learning patterns of HIV-1 resistance to broadly neutralizing antibodies with reduced subtype bias using multi-task learning. by Aime Bienfait Igiraneza, Panagiota Zacharopoulou, Robert Hinch, Chris Wymant, Lucie Abeler-Dörner, John Frater, Christophe Fraser

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Integrating phylodynamics and epidemiology to estimate transmission diversity in viral epidemics. by Gkikas Magiorkinis, Vana Sypsa, Emmanouil Magiorkinis, Dimitrios Paraskevis, Antigoni Katsoulidou, Robert Belshaw, Christophe Fraser, Oliver George Pybus, Angelos Hatzakis

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HIV treatment as prevention: optimising the impact of expanded HIV treatment programmes. by Wim Delva, Jeffrey W Eaton, Fei Meng, Christophe Fraser, Richard G White, Peter Vickerman, Marie-Claude Boily, Timothy B Hallett

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Transmission characteristics of the 2009 H1N1 influenza pandemic: comparison of 8 Southern hemisphere countries. by Lulla Opatowski, Christophe Fraser, Jamie Griffin, Eric de Silva, Maria D Van Kerkhove, Emily J Lyons, Simon Cauchemez, Neil M Ferguson

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HIV treatment-as-prevention research: taking the right road at the crossroads. by Richard Hayes, Sarah Fidler, Anne Cori, Christophe Fraser, Sian Floyd, Helen Ayles, Nulda Beyers, Wafaa El-Sadr, HPTN 071 (PopART) Study Team

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Viral load levels measured at set-point have risen over the last decade of the HIV epidemic in the Netherlands. by Luuk Gras, Suzanne Jurriaans, Margreet Bakker, Ard van Sighem, Daniela Bezemer, Christophe Fraser, Joep Lange, Jan M Prins, Ben Berkhout, Frank de Wolf, ATHENA National Observational Cohort Study

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Has the rate of CD4 cell count decline before initiation of antiretroviral therapy changed over the course of the Dutch HIV epidemic among MSM? by Luuk Gras, Ronald B Geskus, Suzanne Jurriaans, Margreet Bakker, Ard van Sighem, Daniela Bezemer, Christophe Fraser, Jan M Prins, Ben Berkhout, Frank de Wolf, ATHENA National Observational Cohort

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Potential Biases in Estimating Absolute and Relative Case-Fatality Risks during Outbreaks. by Marc Lipsitch, Christl A Donnelly, Christophe Fraser, Isobel M Blake, Anne Cori, Ilaria Dorigatti, Neil M Ferguson, Tini Garske, Harriet L Mills, Steven Riley, Maria D Van Kerkhove, Miguel A Hernán

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Resurgence of HIV infection among men who have sex with men in Switzerland: mathematical modelling study. by Ard van Sighem, Beatriz Vidondo, Tracy R Glass, Heiner C Bucher, Pietro Vernazza, Martin Gebhardt, Frank de Wolf, Steven Derendinger, André Jeannin, Daniela Bezemer, Christophe Fraser, Nicola Low, Swiss HIV Cohort Study

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