Bernhard Palsson

Bernhard Örn Pálsson (born February 22, 1957 in Reykjavík, Iceland) is the Galletti Professor of Bioengineering and an adjunct professor of Medicine at the University of California, San Diego. Provided by Wikipedia
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  1. 1
    Reconstruction annotation jamborees: a community approach to systems biology

    Reconstruction annotation jamborees: a community approach to systems biology by Ines Thiele, Bernhard Ø Palsson

    Published 2010-04-01
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  2. 2
    Formulating genome‐scale kinetic models in the post‐genome era

    Formulating genome‐scale kinetic models in the post‐genome era by Neema Jamshidi, Bernhard Ø Palsson

    Published 2008-03-01
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  3. 3
    Expanding the uses of genome‐scale models with protein structures

    Expanding the uses of genome‐scale models with protein structures by Nathan Mih, Bernhard O Palsson

    Published 2019-11-01
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  4. 4
    Microbial laboratory evolution in the era of genome‐scale science

    Microbial laboratory evolution in the era of genome‐scale science by Tom M Conrad, Nathan E Lewis, Bernhard Ø Palsson

    Published 2011-07-01
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  5. 5
    Applications of genome‐scale metabolic reconstructions

    Applications of genome‐scale metabolic reconstructions by Matthew A Oberhardt, Bernhard Ø Palsson, Jason A Papin

    Published 2009-11-01
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  6. 6
    Basic and applied uses of genome‐scale metabolic network reconstructions of Escherichia coli

    Basic and applied uses of genome‐scale metabolic network reconstructions of Escherichia coli by Douglas McCloskey, Bernhard Ø Palsson, Adam M Feist

    Published 2013-04-01
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  7. 7
    RBC-GEM: A genome-scale metabolic model for systems biology of the human red blood cell.

    RBC-GEM: A genome-scale metabolic model for systems biology of the human red blood cell. by Zachary B Haiman, Alicia Key, Angelo D'Alessandro, Bernhard O Palsson

    Published 2025-03-01
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  8. 8
    Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions

    Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions by Aarash Bordbar, Nathan E Lewis, Jan Schellenberger, Bernhard Ø Palsson, Neema Jamshidi

    Published 2010-10-01
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  9. 9
    Interpreting roles of mutations associated with the emergence of S. aureus USA300 strains using transcriptional regulatory network reconstruction

    Interpreting roles of mutations associated with the emergence of S. aureus USA300 strains using transcriptional regulatory network reconstruction by Saugat Poudel, Jason Hyun, Ying Hefner, Jon Monk, Victor Nizet, Bernhard O Palsson

    Published 2025-04-01
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  10. 10
    A streamlined ribosome profiling protocol for the characterization of microorganisms

    A streamlined ribosome profiling protocol for the characterization of microorganisms by Haythem Latif, Richard Szubin, Justin Tan, Elizabeth Brunk, Anna Lechner, Karsten Zengler, Bernhard O. Palsson

    Published 2015-06-01
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  11. 11
    Genome‐scale models of metabolism and gene expression extend and refine growth phenotype prediction

    Genome‐scale models of metabolism and gene expression extend and refine growth phenotype prediction by Edward J O'Brien, Joshua A Lerman, Roger L Chang, Daniel R Hyduke, Bernhard Ø Palsson

    Published 2013-10-01
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  12. 12
    Decomposition of the pangenome matrix reveals a structure in gene distribution in the Escherichia coli species

    Decomposition of the pangenome matrix reveals a structure in gene distribution in the Escherichia coli species by Siddharth M. Chauhan, Omid Ardalani, Jason C. Hyun, Jonathan M. Monk, Patrick V. Phaneuf, Bernhard O. Palsson

    Published 2025-01-01
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  13. 13
    Pangenome mining of the Streptomyces genus redefines species’ biosynthetic potential

    Pangenome mining of the Streptomyces genus redefines species’ biosynthetic potential by Omkar S. Mohite, Tue S. Jørgensen, Thomas J. Booth, Pep Charusanti, Patrick V. Phaneuf, Tilmann Weber, Bernhard O. Palsson

    Published 2025-01-01
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  14. 14
    Minimal metabolic pathway structure is consistent with associated biomolecular interactions

    Minimal metabolic pathway structure is consistent with associated biomolecular interactions by Aarash Bordbar, Harish Nagarajan, Nathan E Lewis, Haythem Latif, Ali Ebrahim, Stephen Federowicz, Jan Schellenberger, Bernhard O Palsson

    Published 2014-07-01
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  15. 15
    Rapid identification of key antibiotic resistance genes in E. coli using high-resolution genome-scale CRISPRi screening

    Rapid identification of key antibiotic resistance genes in E. coli using high-resolution genome-scale CRISPRi screening by Donghui Choe, Eunju Lee, Kangsan Kim, Soonkyu Hwang, Ki Jun Jeong, Bernhard O. Palsson, Byung-Kwan Cho, Suhyung Cho

    Published 2025-05-01
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  16. 16
    Metabolic growth-coupling strategies for in vivo enzyme selection systems

    Metabolic growth-coupling strategies for in vivo enzyme selection systems by Tobias B. Alter, Pascal A. Pieters, Colton J. Lloyd, Adam M. Feist, Emre Özdemir, Bernhard O. Palsson, Daniel C. Zielinski

    Published 2025-06-01
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  17. 17
    COBRAme: A computational framework for genome-scale models of metabolism and gene expression.

    COBRAme: A computational framework for genome-scale models of metabolism and gene expression. by Colton J Lloyd, Ali Ebrahim, Laurence Yang, Zachary A King, Edward Catoiu, Edward J O'Brien, Joanne K Liu, Bernhard O Palsson

    Published 2018-07-01
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  18. 18
    Systems-level analysis of NalD mutation, a recurrent driver of rapid drug resistance in acute Pseudomonas aeruginosa infection.

    Systems-level analysis of NalD mutation, a recurrent driver of rapid drug resistance in acute Pseudomonas aeruginosa infection. by Jinyuan Yan, Henri Estanbouli, Chen Liao, Wook Kim, Jonathan M Monk, Rayees Rahman, Mini Kamboj, Bernhard O Palsson, Weigang Qiu, Joao B Xavier

    Published 2019-12-01
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  19. 19
    A genome‐scale metabolic reconstruction for Escherichia coli K‐12 MG1655 that accounts for 1260 ORFs and thermodynamic information

    A genome‐scale metabolic reconstruction for Escherichia coli K‐12 MG1655 that accounts for 1260 ORFs and thermodynamic information by Adam M Feist, Christopher S Henry, Jennifer L Reed, Markus Krummenacker, Andrew R Joyce, Peter D Karp, Linda J Broadbelt, Vassily Hatzimanikatis, Bernhard Ø Palsson

    Published 2007-06-01
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  20. 20
    Machine learning uncovers the transcriptional regulatory network for the production host Streptomyces albidoflavus

    Machine learning uncovers the transcriptional regulatory network for the production host Streptomyces albidoflavus by Mathias Jönsson, Renata Sigrist, Tetiana Gren, Mykhaylo Semenov Petrov, Nils Emil Junge Marcussen, Anna Svetlova, Pep Charusanti, Peter Gockel, Bernhard O. Palsson, Lei Yang, Emre Özdemir

    Published 2025-03-01
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