Reconstructing the dynamics of HIV evolution within hosts from serial deep sequence data. by Art F Y Poon, Luke C Swenson, Evelien M Bunnik, Diana Edo-Matas, Hanneke Schuitemaker, Angélique B van 't Wout, P Richard Harrigan

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Transmitted drug resistance in the CFAR network of integrated clinical systems cohort: prevalence and effects on pre-therapy CD4 and viral load. by Art F Y Poon, Jeannette L Aldous, W Christopher Mathews, Mari Kitahata, James S Kahn, Michael S Saag, Benigno Rodríguez, Stephen L Boswell, Simon D W Frost, Richard H Haubrich

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An evolutionary model-based algorithm for accurate phylogenetic breakpoint mapping and subtype prediction in HIV-1. by Sergei L Kosakovsky Pond, David Posada, Eric Stawiski, Colombe Chappey, Art F Y Poon, Gareth Hughes, Esther Fearnhill, Mike B Gravenor, Andrew J Leigh Brown, Simon D W Frost

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Genotypic and functional impact of HIV-1 adaptation to its host population during the North American epidemic. by Laura A Cotton, Xiaomei T Kuang, Anh Q Le, Jonathan M Carlson, Benjamin Chan, Denis R Chopera, Chanson J Brumme, Tristan J Markle, Eric Martin, Aniqa Shahid, Gursev Anmole, Philip Mwimanzi, Pauline Nassab, Kali A Penney, Manal A Rahman, M-J Milloy, Martin T Schechter, Martin Markowitz, Mary Carrington, Bruce D Walker, Theresa Wagner, Susan Buchbinder, Jonathan Fuchs, Beryl Koblin, Kenneth H Mayer, P Richard Harrigan, Mark A Brockman, Art F Y Poon, Zabrina L Brumme

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