An integrated pipeline for the genome-wide analysis of transcription factor binding sites from ChIP-Seq. by Eloi Mercier, Arnaud Droit, Leping Li, Gordon Robertson, Xuekui Zhang, Raphael Gottardo

Get full text

Improving drug repositioning with negative data labeling using large language models by Milan Picard, Mickael Leclercq, Antoine Bodein, Marie Pier Scott-Boyer, Olivier Perin, Arnaud Droit

Get full text

RnaXtract, a tool for extracting gene expression, variants, and cell-type composition from bulk RNA sequencing by Sophiane G. Bouirdene, Simon Gotty, Mickaël Leclercq, Charles Joly-Beauparlant, Emeric Texeraud, Steve Bilodeau, Arnaud Droit

Get full text

Target repositioning using multi-layer networks and machine learning: The case of prostate cancer by Milan Picard, Marie-Pier Scott-Boyer, Antoine Bodein, Mickaël Leclercq, Julien Prunier, Olivier Périn, Arnaud Droit

Get full text

A systematic benchmark of integrative strategies for microbiome-metabolome data by Loïc Mangnier, Antoine Bodein, Margaux Mariaz, Alban Mathieu, Marie-Pier Scott-Boyer, Neerja Vashist, Matthew S. Bramble, Arnaud Droit

Get full text

Impact of fluoroquinolone and heavy metal pollution on antibiotic resistance maintenance in aquatic ecosystems by Emilie Dehon, Stanislava Vrchovecká, Alban Mathieu, Sabine Favre-Bonté, Stanisław Wacławek, Arnaud Droit, Timothy M. Vogel, Concepcion Sanchez-Cid

Get full text

De novo transcriptome assembly and discovery of drought-responsive genes in white spruce (Picea glauca). by Zoé Ribeyre, Claire Depardieu, Julien Prunier, Gervais Pelletier, Geneviève J Parent, John Mackay, Arnaud Droit, Jean Bousquet, Philippe Nolet, Christian Messier

Get full text