Investigation of Super Learner Methodology on HIV-1 Small Sample: Application on Jaguar Trial Data by Allal Houssaïni, Lambert Assoumou, Anne Geneviève Marcelin, Jean Michel Molina, Vincent Calvez, Philippe Flandre

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Comparison of the indirect immunofluorescence assay and a commercial ELISA to detect KSHV antibodies by Valentin Leducq, Léa Ben Said, Sophie Sayon, Vincent Calvez, Anne-Geneviève Marcelin, Aude Jary

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An amplicon-based approach for full-genome characterization of HPV16 by Isabelle Malet, Inès Draa, Valentin Leducq, Fanny Vuong, Pascale Bonnafous, Anne-Geneviève Marcelin, Vincent Calvez, Aude Jary

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In Silico and In Vitro Comparison of HIV-1 Subtypes B and CRF02_AG Integrases Susceptibility to Integrase Strand Transfer Inhibitors by Xiaoju Ni, Safwat Abdel-Azeim, Elodie Laine, Rohit Arora, Osamuede Osemwota, Anne-Geneviève Marcelin, Vincent Calvez, Jean-François Mouscadet, Luba Tchertanov

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A polymorphism at position 400 in the connection subdomain of HIV-1 reverse transcriptase affects sensitivity to NNRTIs and RNaseH activity. by David W Wright, Ilona P Deuzing, Philippe Flandre, Peter van den Eede, Micheline Govaert, Laurentia Setiawan, Peter V Coveney, Anne-Geneviève Marcelin, Vincent Calvez, Charles A B Boucher, Nancy Beerens

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The human gut microbiome and its metabolic pathway dynamics before and during HIV antiretroviral therapy by Oumar Dolo, Fousseini Coulibaly, Anou M. Somboro, Shan Sun, Modibo Diarra, Aminata Maiga, Soungou Bore, Djeneba B. Fofana, Anne-Genevieve Marcelin, Brehima Diakite, Yaya Kassogue, Jane L. Holl, Vincent Calvez, Cheick B. Traoré, Robert Murphy, Anthony A. Fodor, Mamoudou Maiga, Almoustapha I. Maiga

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Development of a new high-yield integration site assay reveals disease-specific patterns across HTLV-1-associated pathologies by Vincent Guiraud, Jérôme Alexandre Denis, Sofia Ben Attia, Erwan Ablin, Ronan Legrand, Véronique Morel, Claire Lacan, Sylvain Choquet, Rabab Debs, Margaux Cheval, Cindy Marques, Alexandre Le Joncour, Jean-Christophe Corvol, Olivier Benveniste, Valérie Pourcher, Anne-Geneviève Marcelin, Agnès Gautheret-Dejean, Clotilde Bravetti, Vincent Calvez

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Benefits of HIV‐1 transmission cluster surveillance: a French retrospective observational study of the molecular and epidemiological co‐evolution of recent circulating recombinant... by Marc Wirden, Fabienne Tombette, Sidonie Lambert‐Niclot, Marie‐Laure Chaix, Stéphanie Marque‐Juillet, Magali Bouvier‐Alias, Benedicte Roquebert, Moise Machado, Veronique Avettand‐Fenoel, Pierre Gantner, Enagnon Kazali Alidjinou, Karl Stefic, Jean‐Christophe Plantier, Vincent Calvez, Diane Descamps, Anne‐Genevieve Marcelin, Benoit Visseaux, the ANRS‐MIE resistance study group

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Intranasally administrated fusion-inhibitory lipopeptides block SARS-CoV-2 infection in mice and enable long-term protective immunity by Said Mougari, Valérie Favède, Camilla Predella, Olivier Reynard, Stephanie Durand, Magalie Mazelier, Edoardo Pizzioli, Didier Decimo, Francesca T. Bovier, Lauren M. Lapsley, Candace Castagna, Nicole A. P. Lieberman, Guillaume Noel, Cyrille Mathieu, Bernard Malissen, Thomas Briese, Alexander L. Greninger, Christopher A. Alabi, N. Valerio Dorrello, Stéphane Marot, Anne-Geneviève Marcelin, Ana Zarubica, Anne Moscona, Matteo Porotto, Branka Horvat

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SARS-CoV-2 lineage-dependent temporal phylogenetic distribution and viral load in immunocompromised and immunocompetent individuals by Karen Zafilaza, Antoine Fauchois, Valentin Leducq, Romain Coppée, Romane Guilbaud, Anna-Maria Franco Yusti, Eve Todesco, Antoine Bridier-Nahmias, Quentin Le Hingrat, Sylvain Choquet, Patrice Cacoub, Zahir Amoura, Benoit Barrou, Valérie Pourcher, Jean-Philippe Spano, Martine Louet, Laura kramer, Tiphaine Goulenok, Mathilde Salpin, Eric Daugas, Richard Dorent, Sébastien ottaviani, Gérard Zalcman, Jade Ghosn, Charlotte Charpentier, Diane Descamps, Anne-Geneviève Marcelin, Vincent Calvez, Valentine Marie Ferre, Stéphane Marot, Cathia Soulie

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Disparities in anti-SARS-CoV-2 reactivity according to vaccines administered in the era of omicron in Cameroon: Lessons for future outbreak response. by Ezechiel Ngoufack Jagni Semengue, Desire Takou, Marina Potesta, Sandrine Claire Ndjeyep Djupsa, Carla Montesano, Collins Ambes Chenwi, Grace Beloumou, Alex Durand Nka, Aurelie Minelle Kengni Ngueko, Evariste Molimbou, Naomi-Karell Etame, Davy-Hyacinthe Gouissi Anguechia, Audrey Rachel Mundo Nayang, Pamela Patricia Tueguem, Therese Ndomgue, Derrick Tambe Ayuk Ngwese, Larissa Gaëlle Moko Fotso, Carlos Michel Tommo Tchouaket, Aude Christelle Ka'e, Nadine Fainguem, Cyrille Alain Abega Abega, Nadia Mandeng, Emilienne Epee, Linda Esso, Georges Etoundi Mballa, Maria Mercedes Santoro, Anne-Cecile Z-K Bissek, John Otokoye Otshudiema, Claudia Alteri, Yap Boum Ii, Anne-Geneviève Marcelin, Francesca Ceccherini-Silberstein, Alexis Ndjolo, Carlo-Federico Perno, Jean Kaseya, Vittorio Colizzi, Nicaise Ndembi, Joseph Fokam

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Recommendations on data sharing in HIV drug resistance research. by Seth C Inzaule, Mark J Siedner, Susan J Little, Santiago Avila-Rios, Alisen Ayitewala, Ronald J Bosch, Vincent Calvez, Francesca Ceccherini-Silberstein, Charlotte Charpentier, Diane Descamps, Susan H Eshleman, Joseph Fokam, Lisa M Frenkel, Ravindra K Gupta, John P A Ioannidis, Pontiano Kaleebu, Rami Kantor, Seble G Kassaye, Sergei L Kosakovsky Pond, Vinie Kouamou, Roger D Kouyos, Daniel R Kuritzkes, Richard Lessells, Anne-Genevieve Marcelin, Lawrence Mbuagbaw, Brian Minalga, Nicaise Ndembi, Richard A Neher, Roger Paredes, Deenan Pillay, Elliot G Raizes, Soo-Yon Rhee, Douglas D Richman, Kiat Ruxrungtham, Pardis C Sabeti, Jonathan M Schapiro, Sunee Sirivichayakul, Kim Steegen, Wataru Sugiura, Gert U van Zyl, Anne-Mieke Vandamme, Annemarie M J Wensing, Joel O Wertheim, Huldrych F Gunthard, Michael R Jordan, Robert W Shafer

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